Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3703 |
Symbol | |
ID | 4457990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4518709 |
End bp | 4519734 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639704476 |
Product | transport system permease protein |
Protein accession | YP_847808 |
Protein GI | 116751121 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0609] ABC-type Fe3+-siderophore transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.912274 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGACC GCCGCATCCT GTTCCCGTTG CTTCTCGTGC TGCTCGTTCT GACCGTGTTG ACCTCCCTGG CGCTGGGCCG GTACCCCGTC GGTCCGAGGG AAATCGTCCG TTTTCTGGCT CACGCCGTAT TCGGGATGAG CGAGCCGGAC ACCGGGGGGC TGGAGACTCT GAGAACGGTT CTCGTTTACA TCAGGATTCC GCGCATCGTT GGCGCGATGC TTGTCGGGAC CGCCCTCGCC GTCTCCGGCG CCGTCTTGCA GTCCGTGTTC ATCAACCCCC TCGTTTCCCC CAGGCTGCTC GGGATTCTTG CCGGGGCATC CTTCGGGGCG GCGCTGGGGA CTGTGCTGTC GCTCAGCTGG GTCGCGGTGC AGGCGATCTC TTCCATCTTC GGCATCGTGG CCGTTCTGGT TGCCGTGGGC CTTGCCGGGC TGTATCGCGG GGACAGGATA CTCCTGCTGG TCCTGGGCGG CATCATCAGC ACGGAGCTCT TCAATTCACT CTTCTTCCTG ATGAAGTACC TGGCGGACCC TTATAGCCAG CTTCCGATCA TCACCTACTG GTTCATGGGG GGATTTGCGC TGGCGGACGC AAAGACCACG CTCGTCCTGT TCTTCCCCAT CGTCGCGGGG GTTCTCGCTC TCCTGCTGCT TTCCCCGTAC CTCAACGTCT TGACCATGGG AGAAGAGGAA GCCCGGTCGC TGGGGGTCAA TACGAAAGCG TTGCGCATGA CGTTCATCCT CATCTCGACG GTTATCAGCA GTTTGACCGT CGCAGTGTGC GGAATGCTGG GGTGGGTCGG ACTGGTGATT CCCCACATGG GCCGGATGCT CGTGGGACCG GACAACCGCG TTTTCCTGCC GGTCACCGCC GTTCTCGGCG CCATATTCGT TCTCGTCGTC GACGACGTCT CCAGGCTGCT CTTCCAAGTG GAGACCCCCC TGGGAATCCT CACCGCGCTG TTCGGGGTTC CCGTTTTCGC CTTGATCCTG AGAAACGCAA GGAAAGGATG GGGCCAATGG AGCTGA
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Protein sequence | MMDRRILFPL LLVLLVLTVL TSLALGRYPV GPREIVRFLA HAVFGMSEPD TGGLETLRTV LVYIRIPRIV GAMLVGTALA VSGAVLQSVF INPLVSPRLL GILAGASFGA ALGTVLSLSW VAVQAISSIF GIVAVLVAVG LAGLYRGDRI LLLVLGGIIS TELFNSLFFL MKYLADPYSQ LPIITYWFMG GFALADAKTT LVLFFPIVAG VLALLLLSPY LNVLTMGEEE ARSLGVNTKA LRMTFILIST VISSLTVAVC GMLGWVGLVI PHMGRMLVGP DNRVFLPVTA VLGAIFVLVV DDVSRLLFQV ETPLGILTAL FGVPVFALIL RNARKGWGQW S
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