Gene Sfum_3703 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3703 
Symbol 
ID4457990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4518709 
End bp4519734 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content62% 
IMG OID639704476 
Producttransport system permease protein 
Protein accessionYP_847808 
Protein GI116751121 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0609] ABC-type Fe3+-siderophore transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.912274 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGACC GCCGCATCCT GTTCCCGTTG CTTCTCGTGC TGCTCGTTCT GACCGTGTTG 
ACCTCCCTGG CGCTGGGCCG GTACCCCGTC GGTCCGAGGG AAATCGTCCG TTTTCTGGCT
CACGCCGTAT TCGGGATGAG CGAGCCGGAC ACCGGGGGGC TGGAGACTCT GAGAACGGTT
CTCGTTTACA TCAGGATTCC GCGCATCGTT GGCGCGATGC TTGTCGGGAC CGCCCTCGCC
GTCTCCGGCG CCGTCTTGCA GTCCGTGTTC ATCAACCCCC TCGTTTCCCC CAGGCTGCTC
GGGATTCTTG CCGGGGCATC CTTCGGGGCG GCGCTGGGGA CTGTGCTGTC GCTCAGCTGG
GTCGCGGTGC AGGCGATCTC TTCCATCTTC GGCATCGTGG CCGTTCTGGT TGCCGTGGGC
CTTGCCGGGC TGTATCGCGG GGACAGGATA CTCCTGCTGG TCCTGGGCGG CATCATCAGC
ACGGAGCTCT TCAATTCACT CTTCTTCCTG ATGAAGTACC TGGCGGACCC TTATAGCCAG
CTTCCGATCA TCACCTACTG GTTCATGGGG GGATTTGCGC TGGCGGACGC AAAGACCACG
CTCGTCCTGT TCTTCCCCAT CGTCGCGGGG GTTCTCGCTC TCCTGCTGCT TTCCCCGTAC
CTCAACGTCT TGACCATGGG AGAAGAGGAA GCCCGGTCGC TGGGGGTCAA TACGAAAGCG
TTGCGCATGA CGTTCATCCT CATCTCGACG GTTATCAGCA GTTTGACCGT CGCAGTGTGC
GGAATGCTGG GGTGGGTCGG ACTGGTGATT CCCCACATGG GCCGGATGCT CGTGGGACCG
GACAACCGCG TTTTCCTGCC GGTCACCGCC GTTCTCGGCG CCATATTCGT TCTCGTCGTC
GACGACGTCT CCAGGCTGCT CTTCCAAGTG GAGACCCCCC TGGGAATCCT CACCGCGCTG
TTCGGGGTTC CCGTTTTCGC CTTGATCCTG AGAAACGCAA GGAAAGGATG GGGCCAATGG
AGCTGA
 
Protein sequence
MMDRRILFPL LLVLLVLTVL TSLALGRYPV GPREIVRFLA HAVFGMSEPD TGGLETLRTV 
LVYIRIPRIV GAMLVGTALA VSGAVLQSVF INPLVSPRLL GILAGASFGA ALGTVLSLSW
VAVQAISSIF GIVAVLVAVG LAGLYRGDRI LLLVLGGIIS TELFNSLFFL MKYLADPYSQ
LPIITYWFMG GFALADAKTT LVLFFPIVAG VLALLLLSPY LNVLTMGEEE ARSLGVNTKA
LRMTFILIST VISSLTVAVC GMLGWVGLVI PHMGRMLVGP DNRVFLPVTA VLGAIFVLVV
DDVSRLLFQV ETPLGILTAL FGVPVFALIL RNARKGWGQW S