Gene Sfum_3661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3661 
Symbol 
ID4458018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4470184 
End bp4471077 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content59% 
IMG OID639704434 
ProductType II secretory pathway component PulK-like 
Protein accessionYP_847766 
Protein GI116751079 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3156] Type II secretory pathway, component PulK 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAC TGCGGCTTGG GCAAGAAAGC GGTGTCGTGA TTGTGGCGGT CCTGTGGATC 
TGCGCTCTGG TCATGTGGCT GGCGCTCCAG ATCAGCGCCG AAACGCGGCT ACGGGGTGAA
GAGCAGACCC ACCTGCTACG CAAGTCCCAG GCATTGCACC TTGCAATCGG TGGATGCTAC
GAGGCGCTGG CCCGAATGGG GCAGAGTCCC TCCCTCGGGC TGGATCGGAG TGGGGAGGAC
AACTGGCTGC CCGACGGCGC CCCCCACCTG GTGGAGTACG AAACCGGCCG CGCCGTGGTG
ATCATGGAAA GGGAAGACCA GAAGATCAAC GTGAACCGCG CAAATCATGC CCAACTCAAG
GCGGCATTCG TGAAACGGGG TATGGAAGGG GAGCCTGCGG AGGAATTGGC CGATCGGATC
GCCGACTTCA TCGACAAGGA CGACTCTCCC CTGCTTCACG GCATGGAACA GGACCAGTAC
AAGCGTGCGG GAATGCACTA CGGCCCTGTC AACGGCCCTT TGGTCAGGCT GGATCAACTC
CTGATGATTC CCGGAATGAG TCAGCAGTTG TTTTACGGGT ACGGGCCGAA GCAAGAGGAT
GCGGAAAGGG AGAAATCCGA AACGGATGAA TCCGAAACGG ATGGTTTCCA GTTTCCTGCA
AGAGATTCGC TGTTCCAGAT GCTTACGGTC TATGGTAGTA ATACCGTCTT GATGGATAAT
CTGCCAGGGG AGGACCTTCG GCCGCAGGCG GTGTGGGTAC GCGGTGGAGT ATACCGTATC
GTGTCTTGCG GAAAAGCCGG TTCCGGACCA CCTTCGGTCA CGGTCTGGCT GGTCGTGCGT
TTTGCGCCCG AGACGCCCGA AGGGTACCAG GTGCTGTACC GCAAGATTCT GTGA
 
Protein sequence
MKKLRLGQES GVVIVAVLWI CALVMWLALQ ISAETRLRGE EQTHLLRKSQ ALHLAIGGCY 
EALARMGQSP SLGLDRSGED NWLPDGAPHL VEYETGRAVV IMEREDQKIN VNRANHAQLK
AAFVKRGMEG EPAEELADRI ADFIDKDDSP LLHGMEQDQY KRAGMHYGPV NGPLVRLDQL
LMIPGMSQQL FYGYGPKQED AEREKSETDE SETDGFQFPA RDSLFQMLTV YGSNTVLMDN
LPGEDLRPQA VWVRGGVYRI VSCGKAGSGP PSVTVWLVVR FAPETPEGYQ VLYRKIL