| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3625 |
|---|
| Symbol | |
|---|
| ID | 4458048 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4437531 |
|---|
| End bp | 4438190 |
|---|
| Gene Length | 660 bp |
|---|
| Protein Length | 219 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639704397 |
|---|
| Product | SH3 type 3 domain-containing protein |
|---|
| Protein accession | YP_847730 |
|---|
| Protein GI | 116751043 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3103] SH3 domain protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000261951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.528602 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG CCCTGTGCAT TTCCACCGCA GTGTTGTTTT TTACCACGTT TCCATTGCCT
CAGGCAAGCT GGGCGGCAAA AGCCTACACG ACCGACGCTC AGGAAATCCC CATGAGGTCC
GCCGCCGGCG CTCAAAACCG CGTTCTGCTC ACGATCCCCA AGGGAAGTGC GGTGGAACTG
GTGAAGACCA ACGAATGGAC CCAGGTTCGA TACACCCCCC CCGACGGAAA GTCGAAGGAA
GGATGGGTGC AGAGCAAATT CCTCGAATCC AGGCCCTCGG AATCCGCGGC CATAAAGGAA
TTGAAAGGCG AAAACACGTC GCTCAGGGAA CAGCTGCAGG AAGCCGAGAT GGCCAGGGCC
GCCCTGGCGC AAAGAGAAAG GGAGGTCTCC GAGAAATTGA CGAAACTGGA GGTTTCCTAC
GAGGAGTTGA AGGGCGGAGC CGCCAGCTAT CTCAAGCTCA AGGGCGAATA CGACGCGGCC
AGGGCTACCC TGGCCAGCAC TCAGGAAAGC GTCCAGGCGC TCATCCAGGA AAACCAGGGC
CTCAAATTCA CGCGGACCAT GTACTGGTTC GCCCTGGGAG CCGTGGTGTT CTTTGCGGGC
CTGCTCGTCG GCATGTGGTT CCGAAGAAAA CGCAAGACGG GGCCGACCTA TCGCCTGTGA
|
|---|
| Protein sequence | MKKALCISTA VLFFTTFPLP QASWAAKAYT TDAQEIPMRS AAGAQNRVLL TIPKGSAVEL
VKTNEWTQVR YTPPDGKSKE GWVQSKFLES RPSESAAIKE LKGENTSLRE QLQEAEMARA
ALAQREREVS EKLTKLEVSY EELKGGAASY LKLKGEYDAA RATLASTQES VQALIQENQG
LKFTRTMYWF ALGAVVFFAG LLVGMWFRRK RKTGPTYRL
|
|---|
| |