Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3581 |
Symbol | |
ID | 4458107 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4390065 |
End bp | 4390733 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639704352 |
Product | Asp/Glu racemase |
Protein accession | YP_847686 |
Protein GI | 116750999 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4126] Hydantoin racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.278765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.265944 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACGCA ACATCGCTTT CCTGCATACG GTGCCTTTTC TCGTGGAGCC TTTTTCCAGT CTGGTTGCGG AGAACCTGTC CGGAGTCGCG TGCTTTCACG TGGTGGACGA GGGAATCCTC AGGGAAGTCT TCCGGGATGG GGTCCTGGCT CCGAAGGTCC TGCGGCGCAT TCTGGAACAT TCCGTGCTCG CGGCACAAGC GGGGGCCGAG CTCATCGTGT TCACCTGTTC CTCGACATCC CCTGCCGTCG ATTGCATCCG GCCGCTCACC GATGTCCCCA TCTTGAAGGT GGATGAACCC ATGGCGGAGA CGGCCGTTCG ACTCGGGTCC AAAATCGGTG TCGTGGCCAC GGTCCGAACC ACGCTGGAGC CCAGCGCCGC CCTGGTGAAA AGCGAGGCGG AGCGTCAGGG GAAAACGGTC GAGGTGGATG CCCGGCTCGA GGCGGAGGCA TTCCAGGCAC GGCTGTCCGG GAACGTTTCC GAGCACGACA GGATCATACG TCAGGCCTGT GCCGATCTGG CGGCCCGCAA TGACGTCGTG GTCCTGGCCC AGGCGTCCAT GGCTCACCTG GCGGAGAGCC TTCAGTCGGA GCTCAAACGC CCGGTGCTCT CCAGCCCTCC GCTGTGCATG GAAGCCCTGA AAAAGCTGGT CGGGGACCGC CAAAGCTGA
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Protein sequence | MIRNIAFLHT VPFLVEPFSS LVAENLSGVA CFHVVDEGIL REVFRDGVLA PKVLRRILEH SVLAAQAGAE LIVFTCSSTS PAVDCIRPLT DVPILKVDEP MAETAVRLGS KIGVVATVRT TLEPSAALVK SEAERQGKTV EVDARLEAEA FQARLSGNVS EHDRIIRQAC ADLAARNDVV VLAQASMAHL AESLQSELKR PVLSSPPLCM EALKKLVGDR QS
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