Gene Sfum_3581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3581 
Symbol 
ID4458107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4390065 
End bp4390733 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content63% 
IMG OID639704352 
ProductAsp/Glu racemase 
Protein accessionYP_847686 
Protein GI116750999 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4126] Hydantoin racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.278765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.265944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGCA ACATCGCTTT CCTGCATACG GTGCCTTTTC TCGTGGAGCC TTTTTCCAGT 
CTGGTTGCGG AGAACCTGTC CGGAGTCGCG TGCTTTCACG TGGTGGACGA GGGAATCCTC
AGGGAAGTCT TCCGGGATGG GGTCCTGGCT CCGAAGGTCC TGCGGCGCAT TCTGGAACAT
TCCGTGCTCG CGGCACAAGC GGGGGCCGAG CTCATCGTGT TCACCTGTTC CTCGACATCC
CCTGCCGTCG ATTGCATCCG GCCGCTCACC GATGTCCCCA TCTTGAAGGT GGATGAACCC
ATGGCGGAGA CGGCCGTTCG ACTCGGGTCC AAAATCGGTG TCGTGGCCAC GGTCCGAACC
ACGCTGGAGC CCAGCGCCGC CCTGGTGAAA AGCGAGGCGG AGCGTCAGGG GAAAACGGTC
GAGGTGGATG CCCGGCTCGA GGCGGAGGCA TTCCAGGCAC GGCTGTCCGG GAACGTTTCC
GAGCACGACA GGATCATACG TCAGGCCTGT GCCGATCTGG CGGCCCGCAA TGACGTCGTG
GTCCTGGCCC AGGCGTCCAT GGCTCACCTG GCGGAGAGCC TTCAGTCGGA GCTCAAACGC
CCGGTGCTCT CCAGCCCTCC GCTGTGCATG GAAGCCCTGA AAAAGCTGGT CGGGGACCGC
CAAAGCTGA
 
Protein sequence
MIRNIAFLHT VPFLVEPFSS LVAENLSGVA CFHVVDEGIL REVFRDGVLA PKVLRRILEH 
SVLAAQAGAE LIVFTCSSTS PAVDCIRPLT DVPILKVDEP MAETAVRLGS KIGVVATVRT
TLEPSAALVK SEAERQGKTV EVDARLEAEA FQARLSGNVS EHDRIIRQAC ADLAARNDVV
VLAQASMAHL AESLQSELKR PVLSSPPLCM EALKKLVGDR QS