Gene Sfum_3552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3552 
Symbol 
ID4458148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4351829 
End bp4352977 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content61% 
IMG OID639704323 
Productacyltransferase 3 
Protein accessionYP_847657 
Protein GI116750970 
COG category[I] Lipid transport and metabolism 
COG ID[COG1835] Predicted acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCG CTCATACCCG ACCCATACCC CCGCAGAGGC TGACCTGGCC GGACATGATG 
AAGGGGATTT CCATCCTCTG GATCGTGTTC TTCCACTTCT TTCATGCCTA CAACAACGGG
CGCTTCCCGT GGCTCCTCGG CTTCGGGAAT TTTTCCGCCT GGCTTGCCGA GCAGCATTCC
GGCTCGATCC TCGGGACCAT TTCCGCGGCC CTCGAAGGCA TCGCCGCCGT GGTGTTCGAG
CGAGGTTCCC AGGCGGTGGG CGTCTTCATC GTGTTGAGCG GGTTCGGGCT CGCCTACTCG
CTGGCCGGGA GCGGCGGGCG GCCGGGCGGA TGGAATTCCT GGTACCGCAG GCGGTTGTTG
AGGCTGTTTC CCATCTATTG GCTGGCCCAT CTGATCTACC TGGTCTCCCC CTTCATGGAC
CGGCAGGACC CGATCGATTT TCGTTTTGTG CTGAGTGTCC TGGGCGACAG ATTCTACCCC
GCCGAAACGG TTTTTTACTA CCTGGTGCCG GCATGGTGGT TCTTCGGGTT GCTCCTGCAA
CTCTACCTCT TTTTCCCCCT CTTCTCCAGG CTGCTGGACA AAGCGGGGGA GGTGAAGTTT
CTCATCCTCT GCGGGGTGTT TACGCTGTTG AGCCGCTATC TCCTGTCCGA AGTCCTGGAG
GCGAACGGCA ATTACGCGCA GGGGGCGTTT TTCGGAGCGC GACTCTGGGA GTTCGCCTTC
GGCATGGTCG TGGGGCGGCG ATACTTTCTG AGAACCGGCG AAACCGAACG TCGCCTTTTT
TCCTGGCGGG CGTCGGGCGC GGGCATCGTG ATCTATATTC TGGGCGCCTA CAGCTATCAG
CCGACCTTCA CCAACATTTT CACCGACATG CTGATCGGCA CCGGCCTGTT CATCATCATC
GCGCACGCGG CGGTCCGGAT GGATCGATGG CCGGCCGCCG CGAGGCTCCT TTCCTCGGTA
GGGGTCTATT CCTACAGCCT CTACCTGCTG CACCAGCCGT ACGCGATCTA TTTCGGAAAG
CTCCTGCGGG AATTCGAAAT GCCCGCCTAC ATAGCGGCAT CGTGTGCCAT CACCGCGATC
ATGACCGTGG GGACGATGCC CCTGGAAAAA TACACCAACC GGTTCGCCGG CCGGCTGTTC
GGGGGGTGA
 
Protein sequence
MQTAHTRPIP PQRLTWPDMM KGISILWIVF FHFFHAYNNG RFPWLLGFGN FSAWLAEQHS 
GSILGTISAA LEGIAAVVFE RGSQAVGVFI VLSGFGLAYS LAGSGGRPGG WNSWYRRRLL
RLFPIYWLAH LIYLVSPFMD RQDPIDFRFV LSVLGDRFYP AETVFYYLVP AWWFFGLLLQ
LYLFFPLFSR LLDKAGEVKF LILCGVFTLL SRYLLSEVLE ANGNYAQGAF FGARLWEFAF
GMVVGRRYFL RTGETERRLF SWRASGAGIV IYILGAYSYQ PTFTNIFTDM LIGTGLFIII
AHAAVRMDRW PAAARLLSSV GVYSYSLYLL HQPYAIYFGK LLREFEMPAY IAASCAITAI
MTVGTMPLEK YTNRFAGRLF GG