| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3510 |
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| Symbol | |
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| ID | 4458177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4292004 |
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| End bp | 4295051 |
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| Gene Length | 3048 bp |
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| Protein Length | 1015 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639704282 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_847616 |
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| Protein GI | 116750929 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.722583 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.530799 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAGTCA CACGGCGTGA GTTCCTTTTC ATCTCGGGAG CCATGGGAGC CGGTCTGGCA
CTGTCGTCTC TGGGGGTCGA CATGCTTCCG GTGGTGGCCT ATGCGGAGGG GCTCAGTAAA
ATCGACAAAG TGAAAAGCGC GAAGGAGATG TATTCCCTCT GCTACCACTG CGCGGTAACT
TGCGGGCTGA TATGCAGCAC CGACACAAAA ACCGGCAAAA TCATAAACAT CGAGGGGGAT
CCGGACAATC CCATCAACGA GGGATCGCTT TGCGCGAAAG GTGCGGCGTC GCTCCAGATG
TCGGCCAGAA ATGAAAACCG TCTGACCAGG GTTCTCTATC GCAAACCGGG CGGCAACCAA
TGGGAGGTCA AGACGTGGGA CTGGGCCTTG ACCAGGATCG CCAAGAACAT CAAGGCGGTA
CGGGACAAGG AATTCATTGT CAAGAACGCC AAAGGGCAGG TGGTCAACCG TGTCGAAGCC
CTGGCTCACA TGGGCAGCTC CAAGCTGGAC AATGAAGAGT GCTGGATGAT CACCACCGCC
ATGAGGGCAC TTGGTCTCGT CTATTTGGAT CACCAGGCTC GGGTCTGTCA CGCTCCCAGC
GTGGCCTCGC TGGCTGAGTC GTTGGGACGT GGTTCGATGA CCAATCATCC CATCGACATC
GGGAACAGCG ATTGTGTCCT CGTCATGGGG GGCAACGCGG CGGAAGCTCA CCCCATCACC
TTCAGGTGGG CCGTGCGTGC CAAGGATAAG GGGGCGAAAA TCATCCACGT CGATCCGCGC
TTCACAAGGA CCTCGGCCAT AGCGGATCAT CATGCGTTCC TTCGTGCAGG CACGGACATC
GCCTTCCTGG GTGGCATGAT CAAGTACATT CTCGACAACA ATAAGTACTT CGAGGAGTAC
GTCAGGAACT ACACCAATGC CTCGTGCAGC ATAGACGAGA AGTTCAGCTT CAAGGACGGA
CTTTTCTCGG GTTACGACCC CGCTGCCAGG AAATACGACA AGTCGACCTG GGTGTTCAGG
CTCGATGCCA ACGGCGTCCC GGAAAAGGAC CCGACGCTCA AGAATCCACG GTGCGTCCTG
CAGATGATGA AGGCCCATTA CGCGCGCTAC GATCTTGAGA AGGTGTCGTC CATTACGGGC
ACCCCTGTGG AAGATCTCAA GACCATTTAT GAACTGTATT CCTCGACCGG GGTGAGAGAT
AAAGCGGGGA CGATCCTCTA CGCACTCGGA TGGACCCAGC ACACGGTGGG GGTGCAGAAC
ATCAGAACGA TGACCATCGT TCAGCTCCTG CTCGGGAATA TCGGCATCGC GGGGGGAGGT
GTCAATGCAT TGCGCGGCCA GCCGAACGTC CAGGGATCGA CGGATCAGGC GATCCTGGCC
CACATTCTTC CAGGCTATCT CAAGACGCCG GCGGCTTCAC TGACCACGCT GGACGAGTAC
CTGGCTAGGA ACACTCCCAA GACCAGGGAG CCCCAGTCGG CCAACTGGTA TCAAAATACC
CCGAAGTACA TGGTGAGCCT CCTCAAATCA TGGTACGGCG ACAAGGCCAT CAAAGAGAAC
GGTTTTGCCT ATTCATACCT TCCTAAGATC GATGACGGGC AGGATGCGAC GCTTCTGGAC
ATGATCGACA AGATGTATGC AGGGAAGATC AAAGGCTTTA CGTGCGTCGG CCAGAATCCG
GCGTGCAGCA ACCCCAATGC CGGCAAAACC CGGAAGGCCC TGGCCAACCT TGACTGGATG
GTGCACATCA ACATTTTCGA CAATGAGACG GCCTCTTTCT GGAAGGGGCC GGGGATGGAT
CCGAAAAAGA TCAAGACGGA GGTCTTTCTC CTGCCGGCGG CGGCTCAAAT GGAAAAAGCG
GGCAGCATGA CCAATACGGG ACGTTGGCTC CAATGGAAAT ACACGGCGGA GAAACCGCCG
GGAGACGCCC TCTCGATGGG CGATATCCTG TACCGGCTGG TAATGAAACT CAAAGACCTC
TACAAGAAGG AAAAGGGGAC CTTCCCCGAT CCCATTCTCG ATCTGCAATG GAATTATGCG
GATGTCAAGG GGATGTATGA TTCCACGGCG GTCGCCAAGG CGATGAACGG ATATTTCCTG
GATGACGTCA CCGTTGGAGA CAAGTCTTTC AAAAAGGGGG AGTGTGTTCC CGGCTTCAGT
TACCTGCAGG CCGATGGAAA GACCTCCTGC GGCATATGGA TCCATTGCGG GAGCTTCACA
CAGGATGGAA CCAACCTGAT CGCCCGAAGG AAGAAAGACG ATCCGACGGG GCTCGGCCTC
TATCCCGAAT GGGCGTGGGC ATGGCCGATG AACCGGCGCA TCCTCTACAA TCGGGCGTCG
GTCGATGAGA AGGGGCAGCC CTGGGATCCC AGGCGGGCGG TCCTCAAGTG GGCCGACGGA
AAGTGGGTGG GCGACGTTCC CGACGGGCCA TGGCCGCCCC TGAGCGACAA GGAAAAAGGA
AAGTTGCCTT TCATTATGAA GCCCGACGGA GTCGCCTCCC TGTTCGGTCC GGGGCTGGCG
GACGGACCGT TCCCCGAGCA CTACGAGCCC CTCGAGAGTC CGCTTTCCAA GAGCCTGATA
TCCGCACAGT TGAGCAGTCC CGTCATCAGG ATATTCAATA GTGATTGCGA TAAGATTGCC
GGGTGCGATC CGAGGTTCCC TCTGGTCTGT ACCACCTACT CCTGCACGGA GCACTGGTGC
ACGGGCGCGG ATACGAGATG GCAGTCGTGG CTCACGGAGA CCATGCCCCA GGCCTACGTC
GAGATCAGCA GGGAATTCGC GGATCTCCGT GGCATCGAGA ACGGTGAAAA GGTCAAGGTT
GAATCGGTTC GCGGCAAAGT CGAATGCGTG GCGATGGTCA CTACGCGGCT GCGTCCTTTG
AAAGTGGGCG GACAGACCCT GCATCAGGTG GGGATCACCT ACAACTACGG CTGGCTTTTC
CCCAAGGATT GCGGCGATTC CGCCAACCTG CTGACCCCCA CCGCCGGCGA CCCCAACACC
GGGACCCCGG AATACAGAGC TTTCATGGTT AATGTGACAA AGGTGTAG
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| Protein sequence | MGVTRREFLF ISGAMGAGLA LSSLGVDMLP VVAYAEGLSK IDKVKSAKEM YSLCYHCAVT
CGLICSTDTK TGKIINIEGD PDNPINEGSL CAKGAASLQM SARNENRLTR VLYRKPGGNQ
WEVKTWDWAL TRIAKNIKAV RDKEFIVKNA KGQVVNRVEA LAHMGSSKLD NEECWMITTA
MRALGLVYLD HQARVCHAPS VASLAESLGR GSMTNHPIDI GNSDCVLVMG GNAAEAHPIT
FRWAVRAKDK GAKIIHVDPR FTRTSAIADH HAFLRAGTDI AFLGGMIKYI LDNNKYFEEY
VRNYTNASCS IDEKFSFKDG LFSGYDPAAR KYDKSTWVFR LDANGVPEKD PTLKNPRCVL
QMMKAHYARY DLEKVSSITG TPVEDLKTIY ELYSSTGVRD KAGTILYALG WTQHTVGVQN
IRTMTIVQLL LGNIGIAGGG VNALRGQPNV QGSTDQAILA HILPGYLKTP AASLTTLDEY
LARNTPKTRE PQSANWYQNT PKYMVSLLKS WYGDKAIKEN GFAYSYLPKI DDGQDATLLD
MIDKMYAGKI KGFTCVGQNP ACSNPNAGKT RKALANLDWM VHINIFDNET ASFWKGPGMD
PKKIKTEVFL LPAAAQMEKA GSMTNTGRWL QWKYTAEKPP GDALSMGDIL YRLVMKLKDL
YKKEKGTFPD PILDLQWNYA DVKGMYDSTA VAKAMNGYFL DDVTVGDKSF KKGECVPGFS
YLQADGKTSC GIWIHCGSFT QDGTNLIARR KKDDPTGLGL YPEWAWAWPM NRRILYNRAS
VDEKGQPWDP RRAVLKWADG KWVGDVPDGP WPPLSDKEKG KLPFIMKPDG VASLFGPGLA
DGPFPEHYEP LESPLSKSLI SAQLSSPVIR IFNSDCDKIA GCDPRFPLVC TTYSCTEHWC
TGADTRWQSW LTETMPQAYV EISREFADLR GIENGEKVKV ESVRGKVECV AMVTTRLRPL
KVGGQTLHQV GITYNYGWLF PKDCGDSANL LTPTAGDPNT GTPEYRAFMV NVTKV
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