Gene Sfum_3491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3491 
Symbol 
ID4458193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4264119 
End bp4264970 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content59% 
IMG OID639704263 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_847597 
Protein GI116750910 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.409471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAAGACG GAAAGACACG ACCGAAGATG CCGACATTCC TCGGTTTGCA CGCACAGCCG 
TCCAGACCGC TCCAGGTGAT GCTCGCCCTG CTGCCGTTCA TTGCGCTTGT CTGCGTCTAT
CTGGGTGTTT CGGAAATGCG TTACCGGAAC AACCCGGCCG ACAAGGTCGT GCCTACGCTC
GGCAAGATGG CCGAAGGCGT GAACCAGGTT GCCTTCACCG AAGACAAACG AACGGGCAAG
GTTCTGCTGT GGGATGATAC GCTGTCCAGC CTCAAACGGC TCGGGACGGG GATCGGTTGC
GCAGCAGTCC TGGCGCTTCT CGCCGGTCTG AACATGGGTC TGTTCCCCGG GGTCCGGAAC
CTGTCGCTCG CTTTCATCAC GTTCGTTTCC ATCATTCCTC CCCTTGCCAT TTTGCCTATT
CTTTTCATTG TCTTCGGCGT GGAGGAAACC GCGAAGGTCG TCCTGATCTT CATCGGGACT
TTCCCCATGA TCACCCGGGG CGTTTACCTG GCCGCCAGGA AGATCCCGAC GGAGCAGATC
TTCAAGGCCC TCACCCTGGG CGCGTCGCAA TTCGCCGTGG CGTACCGCAT CGTGCTTCCT
CAAATCATGC CGTGCCTGAT CGATTCCACG CGGCTGTCCC TCGGAGCGGC CTGGCTCTTC
CTCATCGCCT CAGAGGCGAT TGCGTCGACC GACGGGCTCG GATACCGCAT CTACCTGGTT
CGCCGGTATC TGGCGATGGA CATCATCATC CCTTACGTGC TCTGGATCAC CCTGCTCGGA
TTCCTGTTCG ACCGGTTGCT GCAGGCCTGG ATTTCCAAGC GGTATTCCTG GTACCTCGTC
ACCAAGGAGT AA
 
Protein sequence
MKDGKTRPKM PTFLGLHAQP SRPLQVMLAL LPFIALVCVY LGVSEMRYRN NPADKVVPTL 
GKMAEGVNQV AFTEDKRTGK VLLWDDTLSS LKRLGTGIGC AAVLALLAGL NMGLFPGVRN
LSLAFITFVS IIPPLAILPI LFIVFGVEET AKVVLIFIGT FPMITRGVYL AARKIPTEQI
FKALTLGASQ FAVAYRIVLP QIMPCLIDST RLSLGAAWLF LIASEAIAST DGLGYRIYLV
RRYLAMDIII PYVLWITLLG FLFDRLLQAW ISKRYSWYLV TKE