| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3428 |
|---|
| Symbol | |
|---|
| ID | 4458264 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4191067 |
|---|
| End bp | 4191405 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639704199 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_847535 |
|---|
| Protein GI | 116750848 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2944] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000117512 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGAAGA AAAACAAGAC TCCTAGCGGG CTGGCCAAAG CCATGCTGGA GACGGCCAAA
GATATGGGGC AGGCAGGGCT TTTGGACAAA GAAGCCTACG AAAAGATCAC CATGCGGCAC
CTTGGCGTAA AGGAAAGGGC CAAATTGGAG CCGCTAAGCG GTGATGATAT CCGGGCACTG
CGTGAGAAAG CGCATATGAG CCAGGCCGTC TTTGCTCATG TTCTCAACTT GACGGTTGGC
TATGTATCGC AGTTGGAACG CGGCCTTAAA CGCCCAGCGG GCGCGGTTTT GGCTCTTCTC
AATGTGATCC GCACCAAAGG GATCGACGCC ATCCTTTAA
|
|---|
| Protein sequence | MTKKNKTPSG LAKAMLETAK DMGQAGLLDK EAYEKITMRH LGVKERAKLE PLSGDDIRAL
REKAHMSQAV FAHVLNLTVG YVSQLERGLK RPAGAVLALL NVIRTKGIDA IL
|
|---|
| |