Gene Sfum_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3411 
Symbol 
ID4458282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4176653 
End bp4177117 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content60% 
IMG OID639704183 
ProductNifU domain-containing protein 
Protein accessionYP_847519 
Protein GI116750832 
COG category[C] Energy production and conversion 
COG ID[COG0822] NifU homolog involved in Fe-S cluster formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0321598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAAG GATTGCGGCA GATGAGCGAC CTGGAGAAAC TGATCAGCAG TCAGACCCAA 
AAAAGCTACG GCCCCAAAGA GCCGAACACG AATCCGCGAC AGATCAAATT CGGGAAATTG
CCCAAGGCGA CTTCTTCCGC CAAGGTGACC GGCCCTTGCG GGGAAACGAT GGAGATCCAC
CTCGAGATTC AGGAAGACGA AATCGTCGAC GGCTCTTTCG TGACCGACGG ATGCGGCCCC
AGCAAGGCCT GCGGATTTCT CGCCGTGATG CTCGCGATAG GGAGGAACCT CGACGACGCG
GCCATGATCG AAGGAGACAC GATTCTCGAC ATGATCGAGG ACCTGCCCGA AGACCATCAT
CATTGCGCGT ATCTGGCCGC CGCGACGCTG CAGACGGCGA TCCACAACCA TGTGGCCGCG
CCGCCGCATC GCCACCATCT CGCGACGCCC ACGGCGGAAG AATAG
 
Protein sequence
MHKGLRQMSD LEKLISSQTQ KSYGPKEPNT NPRQIKFGKL PKATSSAKVT GPCGETMEIH 
LEIQEDEIVD GSFVTDGCGP SKACGFLAVM LAIGRNLDDA AMIEGDTILD MIEDLPEDHH
HCAYLAAATL QTAIHNHVAA PPHRHHLATP TAEE