| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3375 |
|---|
| Symbol | |
|---|
| ID | 4458316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 4141129 |
|---|
| End bp | 4142937 |
|---|
| Gene Length | 1809 bp |
|---|
| Protein Length | 602 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639704147 |
|---|
| Product | diphosphate--fructose-6-phosphate 1-phosphotransferase |
|---|
| Protein accession | YP_847483 |
|---|
| Protein GI | 116750796 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | [TIGR02477] diphosphate--fructose-6-phosphate 1-phosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.838756 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.206133 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGAAT TGATTGCGAA GCTCAGTCAG ATGGAGGGTA CGCATTCGCC TTTCGAAAAT
GCGGTGCGGG AACTGCCCAT CCAGGTATGC CGGGTCTTTT TGGACGAAAA AGGTCGAATA
CGACCCGCCG CCTTTCGGGA AACCGACTGT GCCGTCCGGT GCAAAAACCC GGAGCGCATG
GCGGAGATAT TTCCGAAAAC CACAGCCGGG CACGGATATT GTGTGCTTGA AGCATTCAGT
TCCGAGCTGC CCTCAAAGGT AACCGGGAAA CGAGTGGCCG TGCTGTTTTC GGGAGGCCCC
GCCGCCGGCG GCCACAACGT GATCGCCGGA CTCAAGGCGG CCCTCGGGCG CGGGAACACT
CTACTCGGGG TCAAGCAGGG CCCGAAGGGA CTGATCAATG GGGCGCTCTT CGAAATCACC
ACGGAAAGCA TCCAGGCGCG CCTCAACACC GGCGGTTTCG ATTTTCTCGG CACCGACCGG
ACCAAGATCA AGACCCCTCA GCAGTTTGAG AAGGTGAAAG ACACCGTTCT CCGGAACAAG
CTGGACGGGC TGGTGATCGT TGGCGGGGAC GATTCCAACA CCAACGCCGC CTACATTGCC
GAATACCTCG AGGAACAAGG GATCAAATGC AGCGTCATCG GCATCCCCAA GACCATCGAC
GGGGACCTGG CCGTCGGCGC TCACCTTCCC ATCTCGTTCG GCTACGACAC CGCGACGAAG
ATCTATTCGG AACTGGTCGG CAACCTTACG CAAGACGCGG CTTCGGCGGT CAAATACTAC
CATTTCGTGA AACTGATGGG ACGGACGGCA AGTAAGATCA CCCTGGAGGT CGCGTTGCAG
ACGAGACCCG CCGTGGCGCT GATATCTGAA GAAATCGCCG AGAAGAACAT GTCGCTTGAC
GATATCGTGG ATCACATCGT TCGCGTCATC ACCGAGCGCC GGCTCAAAGG GATAAACCAC
GGCGTCATCC TCGTCCCGGA AGGACTGATA GAATTCATTC CCGAGATGAG AACGCTGATC
CAGGAACTCA ACAGTGTCCT TGGCGAATAC GAGAAGGACA TTCGCGACCT GCCGACCCTG
AAGAACAAAC AGGAATTCAT CTACCCGCTG CTCTCCCCCC AGTCGGCGCA GCTCATGGCT
TCTCTTCCCG AGGATATTGA GGAAATGCTC ATCCTCGATC GTGACGACCA CGGCAACGTG
AAGGTCTCAC AAATCGAAAC CGAGAGACTG CTGATCGAGA AGATCCGCTA CAAGATGTCG
GAAGTGAAGA GACATCCGGA CAAGTTTTTC GGGCAGGGTC CGGGGAAGAT CAACGCCACG
CCGGAACAGA TCGAGAAGAT CCAGGGCACG GCCCTCTCCG TTCAGTCCCA CTTTCTGGGA
TACGAGGGAC GCAGCGCCAA GCCCACCTCT TTTGACGCTT CGTTCACATT CAATCTGGGC
CTGACGGCCG GCTCCCTTGT CCTCTCCGGG AAAAGCGGGT ATATGGCCGC CGTCACCGAA
TTTTACAGGG GAGGCAAGGT ATTGGCCCTC CCGCTGGCCG GTCTGATCAC CGTTGAAATG
CGGAAAGGCA AGGAGGAAAT GGTGATCGAG AAATCTCTCG TGAGCCTGGA TTCTCCCGCT
TTCAAAGCAT TCGCACAAAA CCGGGACAAG TGGGCGGCGG AAGACCGCTT CAACAGCCCG
GGTCCCATTC AGCACTGGGG GCCCATAAGC AGGCAGTTGC CCCTTTGCGT GGCACTGGAC
CAGGACTACC CGGATTTCCG GGACTTCGAG CTGGGGGAAG AACATCGGAT CACGTCCGAG
GAGCTTTAA
|
|---|
| Protein sequence | MQELIAKLSQ MEGTHSPFEN AVRELPIQVC RVFLDEKGRI RPAAFRETDC AVRCKNPERM
AEIFPKTTAG HGYCVLEAFS SELPSKVTGK RVAVLFSGGP AAGGHNVIAG LKAALGRGNT
LLGVKQGPKG LINGALFEIT TESIQARLNT GGFDFLGTDR TKIKTPQQFE KVKDTVLRNK
LDGLVIVGGD DSNTNAAYIA EYLEEQGIKC SVIGIPKTID GDLAVGAHLP ISFGYDTATK
IYSELVGNLT QDAASAVKYY HFVKLMGRTA SKITLEVALQ TRPAVALISE EIAEKNMSLD
DIVDHIVRVI TERRLKGINH GVILVPEGLI EFIPEMRTLI QELNSVLGEY EKDIRDLPTL
KNKQEFIYPL LSPQSAQLMA SLPEDIEEML ILDRDDHGNV KVSQIETERL LIEKIRYKMS
EVKRHPDKFF GQGPGKINAT PEQIEKIQGT ALSVQSHFLG YEGRSAKPTS FDASFTFNLG
LTAGSLVLSG KSGYMAAVTE FYRGGKVLAL PLAGLITVEM RKGKEEMVIE KSLVSLDSPA
FKAFAQNRDK WAAEDRFNSP GPIQHWGPIS RQLPLCVALD QDYPDFRDFE LGEEHRITSE
EL
|
|---|
| |