Gene Sfum_3346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3346 
Symbol 
ID4458339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4100856 
End bp4102118 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content55% 
IMG OID639704118 
Productglycosyltransferase-like protein 
Protein accessionYP_847454 
Protein GI116750767 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGC GCGTAAATTA CTGTGTCTAC CGAGAAGGCT TGAGTCCCGT GTTCGCATCG 
CAGGTGGTCC GCCCGGCGGA GAGAGTACGC GAATTGGGCC TTTCTGTCGG CTTGACTCTG
TTGGTATCCG TTGGCCAACT CCTGCGTCCG GGGTTGGCAC GCCGTTGGCA CGAAAGGTGG
TCATGGCTGA GGAAATCTCT GGGTGAAAGC CCGTGCTTGA TTCCTTCCCC TCCTGCAAGA
AGCAGGTGGC TGTGGCCGGA GGATCAGGTT CTGCAAGCGT GGCTCCGTTT CCGTTACCGC
GCGAAAACAC CCGTCATATT GCACTGCCGT GGGACTGAAA TGACCTCCAT TGCGCTGGCT
GCAAGGCGCT CTCTTTCCGG CATCAAAGTC ATCTTTGACT GCCGCGGCAT TAGCCATGCG
GAAATCGAGT ACGTCGTGCG TTCGCAGCAA TTGTCCCGGA TGGATCAGCA CCAACTGGAC
GCAAGAGTCA AACTCCACAG ACAGATGGAA TTGTCCGCCC TTCAGGAAGC GGATGCAGTG
GTCTGTGTCT CTGAGGCAAT GTCCGGCTAT CTTGCGACAG AACACGGAAC ACCGAATTCC
AGAATCACCA CCATCCCTTG CTCGGTTGAA ACAGGACCTT TTTGCAATGC ATCTGCAAAC
AGGGAACAGA TACGTCATGA ATTGGGGCTT TCAGAGCGGC TGGTGGTTGC CTATTGTGGA
AGCCTTCATG CGTGGCAACT TCCCGGAACA TCCCTTGATC TATTCTGTTC GGTCAAGCAG
ATCGACCCCA CCGCCCACTT TCTCGCCATC ACAACCAATG CAAACAGTAT GAAACACATG
ATAGCGGCTC ATGGGATACA AAAAGAAGAC GCCTCTGTGG TTTCTATTCC ACACGATCGC
GTCCCAAGCT ATCTGGCGGC CGCCGACGTC GGACTTCTAC TCCGGGAAGC ATCCCTCCTA
AACCGGGTCT CGTCACCTGT CAAGTTTGGA GAGTATCTTG CAGCCGGCAT ACCTGTAGTC
ATGAGCGAAG GAATCGGTGA CTATTCAATG CTGGCAGAAT CTGAACGAGT GGGCATGGTT
ATTGATATGC GATCTTTACA ACACCCTGAA AAGATCGCGG CTGCAGTGTG TGGTTTCGTC
CAACAATGCC GCCGGGAGGG CGAGGCCTTG CGAAGCCGGT GTAGAGCGGT TGCGAGGCAG
CAGCTGTCGT GGGATGCCCA CCTGCCAAAG CTCGTGCGTC TCTACGAAGC CCTCGCTTCA
TGA
 
Protein sequence
MAVRVNYCVY REGLSPVFAS QVVRPAERVR ELGLSVGLTL LVSVGQLLRP GLARRWHERW 
SWLRKSLGES PCLIPSPPAR SRWLWPEDQV LQAWLRFRYR AKTPVILHCR GTEMTSIALA
ARRSLSGIKV IFDCRGISHA EIEYVVRSQQ LSRMDQHQLD ARVKLHRQME LSALQEADAV
VCVSEAMSGY LATEHGTPNS RITTIPCSVE TGPFCNASAN REQIRHELGL SERLVVAYCG
SLHAWQLPGT SLDLFCSVKQ IDPTAHFLAI TTNANSMKHM IAAHGIQKED ASVVSIPHDR
VPSYLAAADV GLLLREASLL NRVSSPVKFG EYLAAGIPVV MSEGIGDYSM LAESERVGMV
IDMRSLQHPE KIAAAVCGFV QQCRREGEAL RSRCRAVARQ QLSWDAHLPK LVRLYEALAS