Gene Sfum_3344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3344 
Symbol 
ID4458337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4097840 
End bp4098994 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content60% 
IMG OID639704116 
Productglycosyl transferase, group 1 
Protein accessionYP_847452 
Protein GI116750765 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.224872 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGAA CAACACCGAC GGTGCGTGTC CTCCACTGTG TTGACGCTCT CTGGGCGGGC 
GGCGGGGCGC GTTTCATGCA AACCCTGATC CGCTACCAAC AACGACGAAA AGACTGCCAA
CCCGCTCTAT GCGTGTTCTC ACCGCGTGGT CTTGAGCCGT CTAATCTTGT AAATATAGAT
GATTCCCGGA GCTTGGAATT CTCGGGCAGT TTGAAAGACT TTCCAGGGCT TTTCCGCTTT
GCCCTCAACT TCCGGTCCGT TCTGAGAGAT TTCCAACCGG ACATCATCCA TTCCCACATG
TGGCCCGCGT GTCGCCTCTC CGCCCTGGCA GGTGCCGGTA TGGGCCTCCG CCATGTCTGG
CATATCCACG ATACCTGGCC GTGGTTGTGG TCGTCACGTC CTAGAGCGCG GTTTTACAGG
TCATGGACCG GTCTGGCGCA CCGGCTTGCT CGACCGCGCA TGATCGCCGT GTCCGGCAGA
GTGGCCCAAT TCACGGCGGC CCACCTGCGA TGGAAACCGG ATGTCCTGAC CGTAATTCCG
AATGGCGTCG ACCTCAGTGC CGTTCAGCCG GCACGGAGCT CGAAACACGG AACCGGAGAA
CGCCTGGTGG TGGGAATGAC GTCGCTGTTT CTCCCCGGAA AAGGGCATGA GGTATTGATC
CAAGCGGTTG CCGAAATCGT CGGTCGAGGG TTTGACGTTG AGGTCCGATT TGCCGGGTAT
GGCAGCACCG AAGCCCGATG CCGCGCGCTT GTGGCGGAGC TCGGGCTTGA AAATCGGTTC
GACTTCCGAG GATTCGTGAA CGACATCCCA GCATTCTTGG CTGAACTGGA TGTCTTCGTT
TTCCCCTCGA CCGCGCGCGA GGGAATGCCG ATGACCATCC TTGAAGCGAT GGCCGCAGGC
ATACCCGTGG TTTCCGCACC GTTTGACGGA GTGGCGGAGT TGATCGGTTC CGGGCAAAGC
GGCGTCATTG TGCCTGAAGT CACTCCCTGT GCCTTGGCTG CGGTGCTGGA GGATTTGGCG
CAAGACCCGC AAATGCGACT CGCCCTGGGG TCTGCTGCCC GGGAAAGGGC ATGGATGAGG
TTTGGCTTCA ACCGGGTGGA CGAAGAGATT GCCGGGGTGT ACCGGGCGGC CCTTAGGGGA
CGGGCAATCC TTTGA
 
Protein sequence
MTGTTPTVRV LHCVDALWAG GGARFMQTLI RYQQRRKDCQ PALCVFSPRG LEPSNLVNID 
DSRSLEFSGS LKDFPGLFRF ALNFRSVLRD FQPDIIHSHM WPACRLSALA GAGMGLRHVW
HIHDTWPWLW SSRPRARFYR SWTGLAHRLA RPRMIAVSGR VAQFTAAHLR WKPDVLTVIP
NGVDLSAVQP ARSSKHGTGE RLVVGMTSLF LPGKGHEVLI QAVAEIVGRG FDVEVRFAGY
GSTEARCRAL VAELGLENRF DFRGFVNDIP AFLAELDVFV FPSTAREGMP MTILEAMAAG
IPVVSAPFDG VAELIGSGQS GVIVPEVTPC ALAAVLEDLA QDPQMRLALG SAARERAWMR
FGFNRVDEEI AGVYRAALRG RAIL