Gene Sfum_3333 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3333 
Symbol 
ID4458326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4084699 
End bp4085757 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content58% 
IMG OID639704105 
Productpoly-gamma-glutamate biosynthesis protein 
Protein accessionYP_847441 
Protein GI116750754 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2843] Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGACT GGTTGCTCTC ACCAAAAATC CTACAGCAGG CATCTGCGGA AGAGGACATC 
TGCTGGGTCG GGAACTTTGA ATGCGCTATT TCCCAAACCC CGGTCGACAC CCCGGAGAAG
GCCTACCATC TTGTCTTGCC GGAATCGGCC TGGGAATGGG TCGTGCGATC GCCTTTCCGG
GCATTGAATC TTGCGAACAA CCACTCGGCC GACGCGGGTG TGAAAGCCCT TGAAAGGCTC
GTGCGCCGGC TCATGGATGA GACGACGATA CAGCCCTATG GTCTGACGTT CCTCCCTTTC
GCCCGCCTTC AGGTGGGCCG ATACCGGTGT GCCGTCATTG GTTGCGCGGA ACGGGGATAC
CCCCCTAACC GGATGCTCTT GCCCCTGGAC GCCGTGGAAA GGGAGATCGC TCGCATCCGC
CCGAATGCGG ACCGAGTATT CATCACACCC CACTGGGGAT ATGAGGGCGA ATTCGCCGGC
CACCCGTCCC CCCGGCAGCG CAAACTGGCC AGACATTGGA TTGAGGCCGG TGCCGACGGG
ATCTTCGGGC ATCACGCGCA TTCCATTCAT GGCGTCGAGA CCATCCGGGC AAAGCCGGTC
TGGTTTTCTC TCGGCAATTT CGACTTCGAT CATGTGGAAG GCGCAAAGCA CCCTCTTTCC
GGCCTGGGAT TGACGGTTGA TTATTCGGTT GCCGAGCACG ATTCCTGGGT GTACCAATTC
ATCTGGCACC ACGAGTTGAT GCCTTTTTCA GCGGCGCTCC AGCCCCGCGC CGAAAAATAT
CTGCATGAAA TCTCGAAGGA CTTTAAGGGC GTATGCGGAT GGCCAACGCG AAAATGGTTG
CGGTCTGTGG GGCCTCGCTA TATACGAAAG TCGGATTCGA GTTGGCGGAA TCGGTTACGC
AGAACCCCCC TTCCTGGAGT GATTGTGAAA TGGATGCTCT GGAACCTGCT GCCGAAGACT
CTGCTCATGC GAATGGCCTG CCTTTGCACA GAAGCGGCAC CTCTCACAAC GGTAAGAGAG
TTCGAAGAGA GTCTTGCTCC AATGTGGCCA CGCAAGTGA
 
Protein sequence
MEDWLLSPKI LQQASAEEDI CWVGNFECAI SQTPVDTPEK AYHLVLPESA WEWVVRSPFR 
ALNLANNHSA DAGVKALERL VRRLMDETTI QPYGLTFLPF ARLQVGRYRC AVIGCAERGY
PPNRMLLPLD AVEREIARIR PNADRVFITP HWGYEGEFAG HPSPRQRKLA RHWIEAGADG
IFGHHAHSIH GVETIRAKPV WFSLGNFDFD HVEGAKHPLS GLGLTVDYSV AEHDSWVYQF
IWHHELMPFS AALQPRAEKY LHEISKDFKG VCGWPTRKWL RSVGPRYIRK SDSSWRNRLR
RTPLPGVIVK WMLWNLLPKT LLMRMACLCT EAAPLTTVRE FEESLAPMWP RK