Gene Sfum_3276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3276 
Symbol 
ID4458409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4014269 
End bp4015153 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content58% 
IMG OID639704048 
Producthypothetical protein 
Protein accessionYP_847384 
Protein GI116750697 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.864378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCAAGA TCAACAAAGC CGGATACCTT TATATCCTGC TCACCATTCT CATCGGCTTT 
TCGGCCGTGA ATACCGCGAA CAACCTCGTC TACATCATCA CCTCCGGCCT GTTGAGCTAC
ATGCTGGTTT CGGGCTTTTT CGGACGCGGG AACATCCGAG GCATCGAGGC ACAGCTGGAA
TTTCCGGAAG AAACATTCGC GGGAATAGAC ACCCCGGTCA TGGTCAAGCT CGTCAACCGG
CGAAAACGCA TGCCCGCCTT TCTGGTCGGA ATCGAACTGT ACGGACGGGA AGTGTTCTTT
CCTTTCGCCG AGCCGATGTC GTCCACCAGC AGGCATACCA CCATGAGGTT CGACCGCAGG
GGCCTGCACC GGGTGGGCGC GCATACCGTG ACATCGACAT TCCCGTTCAA TTTTTTCACG
CGGTACCGGC GCGTCAGCAG CGAGAAAGCC CTGGTGGTCT ATCCGAAACC GGTCCGGTGC
GGGGTGCCCG GGATTTATGA TTTTCGGTCC CGCACCCTCG GAGACAGACC CTCCGACGCC
TCCGGGTACG ATTCCGACCT GATCTCCATC AGAGACTACG TCCCGGGGGA CCATCCCCGG
TACATCAGCT GGAAATCCAC GGCGAAGACC GGGGTTCTCA TGACCAAGGA GCTGTCCACG
ATCGAGCTCC GGCACCTGAT CATCGATTTC GATCAATTGC CGAAAAAGGA TCTGGAATAC
ACCATCTCCT GCGTCGCTTA CACGGTGCTC AGGATGATTC GTTCCGGAAC CCCGGTGGGG
ATGACGATCG GAGGGCGGAC TTACCCCCCC GACAACTCCT CGGCCCAGAA AACGCTGCTT
CTGACCCGAT TGGCGCTCTA TGGTCAAGAT CAAGACGCTG CTTAG
 
Protein sequence
MIKINKAGYL YILLTILIGF SAVNTANNLV YIITSGLLSY MLVSGFFGRG NIRGIEAQLE 
FPEETFAGID TPVMVKLVNR RKRMPAFLVG IELYGREVFF PFAEPMSSTS RHTTMRFDRR
GLHRVGAHTV TSTFPFNFFT RYRRVSSEKA LVVYPKPVRC GVPGIYDFRS RTLGDRPSDA
SGYDSDLISI RDYVPGDHPR YISWKSTAKT GVLMTKELST IELRHLIIDF DQLPKKDLEY
TISCVAYTVL RMIRSGTPVG MTIGGRTYPP DNSSAQKTLL LTRLALYGQD QDAA