| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3275 |
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| Symbol | |
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| ID | 4458408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 4012390 |
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| End bp | 4014294 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639704047 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_847383 |
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| Protein GI | 116750696 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.574729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCAAGA TCAAGACGCT GCTTAGGCTG ATCACTTATC TGTGTATCGC CGCCGCTTAC
GCATCCGTCG CCCCCTACGT GGCGATCGCC TATTCCCTGA GTTTCGGGGT CCTGTGCGCC
GTGGCGATCG CCCGCGATCA CACGGGGGGC CTTCGTTTGC CGCGCTGGCT GCTGAACCTC
GTCGCCGTGG CGGTCCTGGT GTTTTCTTTC TCCCGGATAT CCCCGGACTA TCTCATCGAA
CCGATCCTCA ACGCGTCTCT GATCCTCATC GGCATCAAGC TCCTCGAAGA CAGGAAATTC
AGGGACTATA TGCAGATTTA TGCCCTCTGC ATGTTTCTTC TGATCGGGTC CAGCCTGATC
TCGTTCAGCG TGATCTTCGT CCTCTATTTC TGCCTGCTCT TCGCCTTTTC CACCGCTTCC
CTGATGCTCC TCGCCTATTT CTCCCACGAG GAAGACATGA CGATCACCAG AGACAACATG
GTGAGGATCA TCCAGAACGC GGCCCTGATC TGTGTCATTT CCATCCCGGC CAGCGGTTTG
TTCTTCCTTA TTCTGCCGCG CACCAACTAC CCGTTGTTCA CCTTTCTGAA CCAGTGGGCC
TACGCCAAGT CCGGCTTCAG CGATTCGGTC ACTCTCGGCG ACGTGGCGGG CATCCAGGAA
GACCGTCACG TCATTTTTCG TGCCGAGATG CCGAAAACGG ACGACGGCCT GCTGTACTGG
CGGGGACTTG AACTCGATGC GTTCAACGGC ACATCCTGGA CGTCGAGCTC CGGCGGAGCC
TCGCTCTTCG AGGAGCTCCG CGGGAAGACG GTTTCCCAGA CGATCTACAT GGAACCATAC
GGCAACAAGT ACCTGTTTGC CCTGGACAAG CCCGTCTCCC TCCAGGTGCA ACTCGGACGC
CGCGTGTGGA GGCTGTCCTC CACCGCCTGG TTCCGCAAGG TGGAAGCGCG TATAAAATAC
ACGGCCCTGT CGGCGCCGAC CGAGCTGCTG CCGGAGAAGA CCATCGAACG GCAACGCTAC
CTGCAGCTGC CCGCCGACTT CTCCCCCCGG ATCAGGAGCC TGGTCGAGAA CATTCTGAAG
GAACGTCCCG GCGACCCCGC GATAGCCCTC TACGATCACG TCAAATTCGG ACAATACCGA
TACTCTCTCG ACAATCTCCC CTTTTCAAAG AATCCTTTGG AGTCCTTTCT GTTCTCCAGG
AAGGCGGGGA ATTGCGAGTA CTTCGCCTCC TCGCTGGCGG TGATGCTGCG CATGGCGGGG
ATTCCCGCCC GCCTGGTGGG CGGCTATCGG GGCGGGTACC ACAACCCGGC GGCGGGATAC
TACATGGTCC TGCAGAAAAA CGCCCACGTC TGGGTGGAAG CTTACATGGA CAACCGCGGA
TGGCTGAGGC TCGACCCGAC GCCCCACTCC CTCGACACCC CCTCGGAGGT CTACGGCCGG
AGCCTGTTCC TGAAGTTGTC GCTGATGATG GACACCTTCA ATTATTATTG GGACAAGATC
GTCATAAGCT ACGATTTCAG TCAGCAGATC AAGCTCTTCA GACAAGTGAA CGCTTTGTTC
GAACACCCCG TGTTTTCGCT GAAAGCGGGC AAAGAGACAC TCATACGGTA TCTCCCGGAG
CTTGCCGTCG TCATCCTCCT GGGAGGAATC GCCTTCGGAC TGCTGAGGCC TCGGAAAAGC
GCGGAGGCGA GGATCATCGA ACGCTTCGCC GCCAAGATGG CCTCGCTCGG CTACAGGAAG
AGGGAGGCGG AGGGACTGGA AGAGTTCCTG GGCCGCATCG AGGATGCGGA TGTGCGCCAA
AAGGCGCATC TCTTCGTCGA TGAGTTTCAG CATCTTTTCT ACAGGGACTG CACGTTCGAC
AGGGAACGGA TCGTCCATCT CGAAAGGAGA ATCGACGATA TTTAG
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| Protein sequence | MVKIKTLLRL ITYLCIAAAY ASVAPYVAIA YSLSFGVLCA VAIARDHTGG LRLPRWLLNL
VAVAVLVFSF SRISPDYLIE PILNASLILI GIKLLEDRKF RDYMQIYALC MFLLIGSSLI
SFSVIFVLYF CLLFAFSTAS LMLLAYFSHE EDMTITRDNM VRIIQNAALI CVISIPASGL
FFLILPRTNY PLFTFLNQWA YAKSGFSDSV TLGDVAGIQE DRHVIFRAEM PKTDDGLLYW
RGLELDAFNG TSWTSSSGGA SLFEELRGKT VSQTIYMEPY GNKYLFALDK PVSLQVQLGR
RVWRLSSTAW FRKVEARIKY TALSAPTELL PEKTIERQRY LQLPADFSPR IRSLVENILK
ERPGDPAIAL YDHVKFGQYR YSLDNLPFSK NPLESFLFSR KAGNCEYFAS SLAVMLRMAG
IPARLVGGYR GGYHNPAAGY YMVLQKNAHV WVEAYMDNRG WLRLDPTPHS LDTPSEVYGR
SLFLKLSLMM DTFNYYWDKI VISYDFSQQI KLFRQVNALF EHPVFSLKAG KETLIRYLPE
LAVVILLGGI AFGLLRPRKS AEARIIERFA AKMASLGYRK REAEGLEEFL GRIEDADVRQ
KAHLFVDEFQ HLFYRDCTFD RERIVHLERR IDDI
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