| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3257 |
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| Symbol | |
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| ID | 4458425 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3989357 |
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| End bp | 3990952 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639704029 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_847365 |
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| Protein GI | 116750678 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACC TGCTGCCGGG AGACCATTTG TGCTATCTTT ATGAATCGGA GCGGGAGCGC
CGGGAGGTGC TCATCATGTT CGTTCGCCAG GGTCTGGACT GGCATGAGAA AATCCTCTAC
GTGGCGGACC CCCCCGGCTT TGAAGGACTG GCCGAAGGGT TGCGCGCCCA GGGAGTGGAC
CCCGCGGGAT ACGTCGAATC CGGGCAGATC ACGGTTCTTG CCCCCAGCAG CCTTTTCGGG
ACAGATCGCG GATTCGACCC TGCCGCAATG ATCGAGATCA TCGAGGACGA AACCGAAAAG
GCGATGGACC AGGGTTTCAA CGGTCTCCGG GTGACGGTGG AAACGCAAGG GGTGCTGAAG
GAGACGGCGG GGGAGCACCG GCTGCTGGAA TTCGAAAACC TGCTGAACGG GTTTTTCCCG
GGCAAAAGGT GTCTCGCCTT GTGTCAGTAC CATAGCGAGG ATTTCAGCCC GGCATTGTTT
CACCAGGTAC TGGCCATCCA CCCGGCCGTC CTGGCGGGAA ACTCGGTGCA CCGGAATCCC
TACTATGTCC CTCCGCGATC CCCGGAAGCA GAGGGAGACG CGATGCCCGA CGTTGAGACC
TGGCTGGAGA GGCTCGGGGC GGGCGAGGGA CCGGTCAAAG CCGGCGGCGC GGGTTCGAGC
GGAATGGTCG CAACGCTGTT CCGCTGGGAG TATCCCGAGG TGCTGGAACA GTACCTGGAC
GAGCTGAGCG AGGTGGCCGT CGCCATACTC GACCGGGGGA AAAATATCCT GCACTGCAAT
CGCGGCTTCC TCCGGCTGTT GAATCAGTCG AATGATCCCG GGGGCCGGAA CCTGGCGGAG
TTCCTCATTG CCGACAGCCT CGCGCACCTG CCCTTCCCGC CGCCCGGAGC CCATAAGAAG
ACCCGTCTGA ATTTCCTGCC CACCGGTTCC GTCGTGCATA CCCTCAACTG CTTCATCTTC
GGGACGCTCC AGGGATACGT GATCGTCGGC GAGAGGATCA TGCTGACCAA CAACGATATC
GTCGCCGGCA TTTCGAACCT CACAAACGAA CTGGCCAGCG TGACGCACGA ACTGCAGAAG
AAATGCGTCG CACTCGAAAG AGCCAATGCG GTCATAGGCA AGCTCGCCGT CTCCGATCCC
GTTACCGGTC TCTTCAACAG CCGATCGCTC ATGGCGGAGT TGAGCCGGGC GGTGTCTCTG
GCGAGACGCC ACGGCGGCCC CCTGTCTCTG GCTGTCGGAG GTCCGGATCC GCTCACGCCC
GCACGCACCC ACGACCGGAG CGAAGAAACA CTGAAAGATT TCGTCGCCCT TTTGGCTGGT
TCATGCCGCA AGGAAGACTT CTTCGCCTGC CTGGAGGGCG GGCGGTTCGC AGTCATCCTG
CCGCATACCG ATCTTTCGGG AGCTGCCGTT TTCGCGAAAA AAATCACCGA GTCCTTCGTC
CGCCCGGCCG CCAGCGAAAC CGCAGAAAAT CTGACCGTCA GCTTCGGGAT CACTGGATTC
GCCCGGGAGG ACACCCCGGA GAACATCATC CGACGGGCCG CCACCGCGCT CGATGAAGCC
AGGCGGGCCG GCGGGAACCG CGTGGAGGAA CGGTAG
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| Protein sequence | MSDLLPGDHL CYLYESERER REVLIMFVRQ GLDWHEKILY VADPPGFEGL AEGLRAQGVD
PAGYVESGQI TVLAPSSLFG TDRGFDPAAM IEIIEDETEK AMDQGFNGLR VTVETQGVLK
ETAGEHRLLE FENLLNGFFP GKRCLALCQY HSEDFSPALF HQVLAIHPAV LAGNSVHRNP
YYVPPRSPEA EGDAMPDVET WLERLGAGEG PVKAGGAGSS GMVATLFRWE YPEVLEQYLD
ELSEVAVAIL DRGKNILHCN RGFLRLLNQS NDPGGRNLAE FLIADSLAHL PFPPPGAHKK
TRLNFLPTGS VVHTLNCFIF GTLQGYVIVG ERIMLTNNDI VAGISNLTNE LASVTHELQK
KCVALERANA VIGKLAVSDP VTGLFNSRSL MAELSRAVSL ARRHGGPLSL AVGGPDPLTP
ARTHDRSEET LKDFVALLAG SCRKEDFFAC LEGGRFAVIL PHTDLSGAAV FAKKITESFV
RPAASETAEN LTVSFGITGF AREDTPENII RRAATALDEA RRAGGNRVEE R
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