Gene Sfum_3216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3216 
Symbol 
ID4458454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3938364 
End bp3939053 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID639703988 
Producthypothetical protein 
Protein accessionYP_847324 
Protein GI116750637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGACCC CGCGGGAAAC GACTCGAACC CTCAAGGCGG GACTGCGGCA GGTGCTGCAG 
TCGGACGACT GGGACGACCG CCTGCTGGAA TGGTCGTATT CCCAATCGCG CAGACTGATC
AACCCTCTCC TCTCATTTCT CCTCTCTCCC GACGAGACCC TCAAGTGGCG CTCCGTCTCA
GCGGTCGGCC TGGTGATGTC GGTGACGGCC TCGACCGACA TGGAAGCGGC GCGCGTCATC
ATGCGGCGTC TCATCTGGAG TCTCAACGAT GAATCGGGCG GCATCGGGTG GGGATCCCCC
GAAGCCATGG GTGAGATCAT GGCCTGCCAT CGCGGCCTGG CCGAGGAGTA CCATCGCATC
CTGGTCTCTT ACATCCGGCG GGACGGCAAT CTTCTGGAGA ATGAATTGCT CGAGCGGGGG
GTGCTCTGGG GAATCGGGAG GCTGGCACAG GTGCGGGCGG GTTTGATCGG CTATGCGCCG
CCTCACGTCG CCCTCTATCT TGAATCGCAT GACCCCCTTC ATCGGGGGCT GGCGGCATGG
AGCCTGGGAT TCCTCGACGC TTCACCGTTC CGGCATCAAC TGGAACGGCT CCTCGACCAG
GGAGTGGAAA TCCGGGTCTA CGAAAACCGG AGCATACGGT CGTTCAGCAT CGGTGAACTG
GCGGCGCGGG CGATCCGCAA CAGGGGATGA
 
Protein sequence
MKTPRETTRT LKAGLRQVLQ SDDWDDRLLE WSYSQSRRLI NPLLSFLLSP DETLKWRSVS 
AVGLVMSVTA STDMEAARVI MRRLIWSLND ESGGIGWGSP EAMGEIMACH RGLAEEYHRI
LVSYIRRDGN LLENELLERG VLWGIGRLAQ VRAGLIGYAP PHVALYLESH DPLHRGLAAW
SLGFLDASPF RHQLERLLDQ GVEIRVYENR SIRSFSIGEL AARAIRNRG