Gene Sfum_3101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3101 
Symbol 
ID4458581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3812052 
End bp3812792 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content61% 
IMG OID639703872 
ProductABC transporter related 
Protein accessionYP_847209 
Protein GI116750522 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.571993 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGAAGA AGAACCGTCC TATGCTTGAA GTCAGGAATC TGCATGTACG TTACGGCAGC 
ATAACCGCCT TGCGGGGAAT CAGCTTCCAC GTGAACGACG GAGAAGTGGT TGCCTTGCTG
GGAGCAAACG GAGCGGGGAA GTCGACGACC CTGATGAGCA TCATGCGGTT GCCGCCGCCG
GAAGGACCGA CGGTGAGCGA GGGCGGCATC ACTTACAACG GAATCGATCT GCTCCCCGTC
CCGGCCCATG TCCTGGTGGC GAAATTCGGT ATCGGGCTCG TCCCCGAAGG GCGGCACATT
TTCGGAAATC TGAGCGTGCT GGAGAACCTG AAACTGGCCA GCTACGCCCG GACCGACAAA
GAGAACCTCG ACGCCGACTA CGAGCGGGTG TTCTCGCTCT TCCCGCGCCT CAAGGACAGG
AGGAACCAGC GGGGGGACAC CCTGAGCGGC GGGGAGCAAC AGATGCTCGC CATGGGGCGC
GCGTTCATGA GCGGGGTCCG TTTCATTCTT CTGGACGAAC CCTCGATGGG CCTGGCCCCG
CTGCTCATGC AGGAGCTTTT CCGGGTGCTC AAGCAGCTCA ACGAAGCCGG AATGACGATC
CTGGTGGTGG AGCAGAACGC CCGCATCGCC TTGAAATACG CACACCGGGC CTATGTCCTG
GAGGCGGGGA ACATCGTGAT GGAAGGCTCC GCCGAGGCGT TGCGCAACGA TCCGAAGATC
CAGAGGGCTT ATCTCGGATA G
 
Protein sequence
MEKKNRPMLE VRNLHVRYGS ITALRGISFH VNDGEVVALL GANGAGKSTT LMSIMRLPPP 
EGPTVSEGGI TYNGIDLLPV PAHVLVAKFG IGLVPEGRHI FGNLSVLENL KLASYARTDK
ENLDADYERV FSLFPRLKDR RNQRGDTLSG GEQQMLAMGR AFMSGVRFIL LDEPSMGLAP
LLMQELFRVL KQLNEAGMTI LVVEQNARIA LKYAHRAYVL EAGNIVMEGS AEALRNDPKI
QRAYLG