Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3101 |
Symbol | |
ID | 4458581 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3812052 |
End bp | 3812792 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639703872 |
Product | ABC transporter related |
Protein accession | YP_847209 |
Protein GI | 116750522 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.571993 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGAGAAGA AGAACCGTCC TATGCTTGAA GTCAGGAATC TGCATGTACG TTACGGCAGC ATAACCGCCT TGCGGGGAAT CAGCTTCCAC GTGAACGACG GAGAAGTGGT TGCCTTGCTG GGAGCAAACG GAGCGGGGAA GTCGACGACC CTGATGAGCA TCATGCGGTT GCCGCCGCCG GAAGGACCGA CGGTGAGCGA GGGCGGCATC ACTTACAACG GAATCGATCT GCTCCCCGTC CCGGCCCATG TCCTGGTGGC GAAATTCGGT ATCGGGCTCG TCCCCGAAGG GCGGCACATT TTCGGAAATC TGAGCGTGCT GGAGAACCTG AAACTGGCCA GCTACGCCCG GACCGACAAA GAGAACCTCG ACGCCGACTA CGAGCGGGTG TTCTCGCTCT TCCCGCGCCT CAAGGACAGG AGGAACCAGC GGGGGGACAC CCTGAGCGGC GGGGAGCAAC AGATGCTCGC CATGGGGCGC GCGTTCATGA GCGGGGTCCG TTTCATTCTT CTGGACGAAC CCTCGATGGG CCTGGCCCCG CTGCTCATGC AGGAGCTTTT CCGGGTGCTC AAGCAGCTCA ACGAAGCCGG AATGACGATC CTGGTGGTGG AGCAGAACGC CCGCATCGCC TTGAAATACG CACACCGGGC CTATGTCCTG GAGGCGGGGA ACATCGTGAT GGAAGGCTCC GCCGAGGCGT TGCGCAACGA TCCGAAGATC CAGAGGGCTT ATCTCGGATA G
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Protein sequence | MEKKNRPMLE VRNLHVRYGS ITALRGISFH VNDGEVVALL GANGAGKSTT LMSIMRLPPP EGPTVSEGGI TYNGIDLLPV PAHVLVAKFG IGLVPEGRHI FGNLSVLENL KLASYARTDK ENLDADYERV FSLFPRLKDR RNQRGDTLSG GEQQMLAMGR AFMSGVRFIL LDEPSMGLAP LLMQELFRVL KQLNEAGMTI LVVEQNARIA LKYAHRAYVL EAGNIVMEGS AEALRNDPKI QRAYLG
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