| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3026 |
|---|
| Symbol | |
|---|
| ID | 4458646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3731272 |
|---|
| End bp | 3732273 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639703798 |
|---|
| Product | ketol-acid reductoisomerase |
|---|
| Protein accession | YP_847135 |
|---|
| Protein GI | 116750448 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0059] Ketol-acid reductoisomerase |
|---|
| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.219596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGATTT ATTACGAGGC GGATGCGGAT CTGAATGTAC TTCGTGGGAA GAAGGTCGCC
GTGGTCGGCT ACGGCAGCCA GGGACATGCC CAGGCGCAGA ACCTGCGCGA CAGCGGTGTC
GAGGTCGTGG TGAGCGACCG GGCGGGCAGT GAGAATTTCG AAAAGGCGAA GGAAGACGGT
TTCTCCCCCG TTTCGGCCAA GGAAGCTGCG GCAGCCTGCG AAATCGTGCA GATCCTCACC
GAGGATCACG TTCAGGCGCA GTTGTACCGG CAGGAAGTGG GGCCCGCCAT GAAAGCAGGG
GAAACGCTTC TTTTTTCGCA CGGTTTCAAC ATCCATTACG GTCAGATCGT TCCGCCCAAG
GATATCAACG TGGTCATGGT GGCTCCCAAG GGACCCGGCC ACCTGGTGCG CAGCGAATAC
GTGCGGGGAG CCGGGGTTCC CGCCCTGGTG GCGGTTCAGC AGGACGCCTC GGGCAATGCA
CTGCAGATCG CGCTCGCTTA TGCCAAGGGC ATCGGCGCCA CTCGCGCGGG TGTCCTGGAG
ACCACGTTCA AAGAAGAAAC CGAAACCGAC CTGTTCGGGG AGCAGGCCGT GCTGTGTGGC
GGCGTGTCCG AGCTCATCAA GGCGGGATTC GACACTCTGG TGGAAGCCGG GTACCAGCCC
GAAATCGCTT TTTTCGAGTG CATGCACGAG CTGAAGCTGA TCGTGGATTT GATCTACCGG
GGCGGTCTGG CCTACATGCG CTATTCGGTC AGCGATACCG CCGAATACGG GGATCTCAGC
CGCGGCAAGC GGATCATCAC CGCGGAGACG CGCGCCGAAA TGAAGCGGAT CCTCGAAGAA
GTCCAGTCAG GGGATTTCGC CCGTGAATGG ATTCTGGAGA ATATGGCGGG AAGGCCCATG
TTTCGGACCA CTCGCGAGCG TGAGAAGAAA CTCCTGGTGG AGGATGTCGG GGCGAAGCTG
CGTTCCATGA TGCCGTTCCT CGATGCCGTG AAGATGATTT GA
|
|---|
| Protein sequence | MRIYYEADAD LNVLRGKKVA VVGYGSQGHA QAQNLRDSGV EVVVSDRAGS ENFEKAKEDG
FSPVSAKEAA AACEIVQILT EDHVQAQLYR QEVGPAMKAG ETLLFSHGFN IHYGQIVPPK
DINVVMVAPK GPGHLVRSEY VRGAGVPALV AVQQDASGNA LQIALAYAKG IGATRAGVLE
TTFKEETETD LFGEQAVLCG GVSELIKAGF DTLVEAGYQP EIAFFECMHE LKLIVDLIYR
GGLAYMRYSV SDTAEYGDLS RGKRIITAET RAEMKRILEE VQSGDFAREW ILENMAGRPM
FRTTREREKK LLVEDVGAKL RSMMPFLDAV KMI
|
|---|
| |