Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2927 |
Symbol | |
ID | 4458754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3617644 |
End bp | 3618351 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639703699 |
Product | nucleotidyl transferase |
Protein accession | YP_847037 |
Protein GI | 116750350 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.612838 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATGG GAATCATTGC GGCCGGAAAG GGAGAACGTC TTGCCCGGGG GGGAATTGCA GCGCCCAAGC CGTTGGTATC CGTAGGAGCG AGGCCGCTCA TCGCCAGGAT CATCGATGCT GGCGCGCATA TCCCCGTCAG TTCCATCGCC GTCATCGTCA ACGACCTGGA CCCCGCCGTG GCCGGCTACC TGCGTTCGAT CCGCTCACCA GCCCCATTGG ACCTCGTCGT CAAGACCACT CCCAGCTCCA TGGAAAGTCT CTTTTGCCTG GCCCCTTTCC TGGACGATGA ACCCTTTGTC CTGTTCACCG TGGACGTCGT GTTCGCGCAA CAGACTCTGA AGGATTTCCT TCAGGCTGCC GAATCCATAA AAAGCTCCAG CGGGGTTTTG GCGCTCACGC GCTTCGTCGA CGACGAAAAA CCCCTGTGGG TGGCCGTCGA CGGTTCCAAC AGAATAACGG CCATGGGCGA TGCCGCCAGG GGCAGTCCTT TTGTGACCGC GGGGTTCTAT TATTTCACCC CCGAAATCTT CAATGAGATC GAAGCGGCGC GGAGGAGGAA CTTGAATGCG CTGCGCGGCT TTCTCGGTCA TCTGATCGAC AGCGGATACC TGATGAGCGG CGTCCCGGTC TCCAAGACCG TCGATGTCGA TTATCCCGAG GACATCGAAA AGGCCGAGGC CTTCTTGAAG GAAATCAACG AGGCATGA
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Protein sequence | MKMGIIAAGK GERLARGGIA APKPLVSVGA RPLIARIIDA GAHIPVSSIA VIVNDLDPAV AGYLRSIRSP APLDLVVKTT PSSMESLFCL APFLDDEPFV LFTVDVVFAQ QTLKDFLQAA ESIKSSSGVL ALTRFVDDEK PLWVAVDGSN RITAMGDAAR GSPFVTAGFY YFTPEIFNEI EAARRRNLNA LRGFLGHLID SGYLMSGVPV SKTVDVDYPE DIEKAEAFLK EINEA
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