Gene Sfum_2927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2927 
Symbol 
ID4458754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3617644 
End bp3618351 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content59% 
IMG OID639703699 
Productnucleotidyl transferase 
Protein accessionYP_847037 
Protein GI116750350 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.612838 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATGG GAATCATTGC GGCCGGAAAG GGAGAACGTC TTGCCCGGGG GGGAATTGCA 
GCGCCCAAGC CGTTGGTATC CGTAGGAGCG AGGCCGCTCA TCGCCAGGAT CATCGATGCT
GGCGCGCATA TCCCCGTCAG TTCCATCGCC GTCATCGTCA ACGACCTGGA CCCCGCCGTG
GCCGGCTACC TGCGTTCGAT CCGCTCACCA GCCCCATTGG ACCTCGTCGT CAAGACCACT
CCCAGCTCCA TGGAAAGTCT CTTTTGCCTG GCCCCTTTCC TGGACGATGA ACCCTTTGTC
CTGTTCACCG TGGACGTCGT GTTCGCGCAA CAGACTCTGA AGGATTTCCT TCAGGCTGCC
GAATCCATAA AAAGCTCCAG CGGGGTTTTG GCGCTCACGC GCTTCGTCGA CGACGAAAAA
CCCCTGTGGG TGGCCGTCGA CGGTTCCAAC AGAATAACGG CCATGGGCGA TGCCGCCAGG
GGCAGTCCTT TTGTGACCGC GGGGTTCTAT TATTTCACCC CCGAAATCTT CAATGAGATC
GAAGCGGCGC GGAGGAGGAA CTTGAATGCG CTGCGCGGCT TTCTCGGTCA TCTGATCGAC
AGCGGATACC TGATGAGCGG CGTCCCGGTC TCCAAGACCG TCGATGTCGA TTATCCCGAG
GACATCGAAA AGGCCGAGGC CTTCTTGAAG GAAATCAACG AGGCATGA
 
Protein sequence
MKMGIIAAGK GERLARGGIA APKPLVSVGA RPLIARIIDA GAHIPVSSIA VIVNDLDPAV 
AGYLRSIRSP APLDLVVKTT PSSMESLFCL APFLDDEPFV LFTVDVVFAQ QTLKDFLQAA
ESIKSSSGVL ALTRFVDDEK PLWVAVDGSN RITAMGDAAR GSPFVTAGFY YFTPEIFNEI
EAARRRNLNA LRGFLGHLID SGYLMSGVPV SKTVDVDYPE DIEKAEAFLK EINEA