| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2923 |
|---|
| Symbol | |
|---|
| ID | 4458750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3612780 |
|---|
| End bp | 3614069 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639703695 |
|---|
| Product | CDP-alcohol phosphatidyltransferase |
|---|
| Protein accession | YP_847033 |
|---|
| Protein GI | 116750346 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCG CTGAATTGAC CGCTTTCGCG ACAGCCCGCG TGGAAAGCCG CGCCCATCCC
ACTCGCGGCG GGAGTGTGCC GCGCCAGTGT GTCCTCGATG CCTCCGGAAG CGGCGCCTGG
GAGAAAGTCG GCGGCATTTC GACGATCGCC AGAATGCTTT ATCACCTGGA TAAGCTGGGC
ATCGAGGAAG TCGTCGTCCT GCTGAGCTCC GAGCACGGGC TCAAGGGGCT CGAAAGATGG
ACGGGCGGGT TGAGGCTGCG ACAAGCGGGC AAAGACGCTC ATCTGAGCCT GGCGGGCAAT
CTCCTTTCCA TGGCCCGGCT CGACCGGCGT TTTCTTTACC TTGACGCGGC TCACCTGGTG
GACCCTCGTC TCATCAAAGC CCTGGCGGCC GCTTCGAAAA CCACCCTCAC CTTCATGGAC
CCACGGGACG CAAGAAACGG GACCGTTCGC GCCGGGTTGC TCCACGTCGA CGATCTGCCG
GCCTGGGCCG AGGAGGGGGA TGCGGCGCTT GCCCGACGCT CCAAACCGCT TTTTCCTTCG
AGTATCGATC CGTATTCGCC CGAGATCAGA GGCCCCCTGA CACCCTATTT CCTGGAGGTG
CGATCGAGGG AAGAGGCTCT CGAGGCGACC CGGCTGCTGA TTCGATCCCA GCAGAAGCAC
GTTATGGACC TGCCCGCCGA GTTCATCGAT CCGCCGTTTG AAAACGCGTT GACCTTCTGG
CTGTGCAGGA CTTCAATTTC GCCCGACATG GTCACGCTCA TAGGAGGCGC GGTCGCTTTC
TTCGTTGCCT GGTTGTTCTG GCACGGCTAT TTTGTGGCTG GTGCCCTGCT CACCTTCGTC
GTTGAAATCC TGGATGGAGT CGATGGAAAG CTCGCGCGAA CCAAGCTTCA ATTCTCGAGA
TTCGGGCGTC ACGAGGATGT CTTCGACTAT TTATGCGAAA ACAGCTGGTA CGTTGCACTG
GGCGTGGGAT TGAGCGCTTC GACCCCGGGC AATTGGCCTT TTTTTGCCGC CGCCCTGTTG
ATTTTCTCGG ATACCGTCGA TAACGTCCTC TACACCCTGG CCGGCAAGTG GCACGGGAAA
AGCATCGACC TGTACCGGCC GTTCGACGCG GCTTTCCGGC GGATCGCCGG ACGTCGGAAC
ATCTACGGTT TTATGTTCAT CGTCGGGTTC CTGGCGGGAT TTCCGCTGCA AACCTTTATC
CTGGCAGCGG TTTGGGCCGC CGTTACGGCG GCGATTCACC TGGTTCGATT GATCCAATTC
GGCAGAGCCG TCGCGCGGGG TTGCGGATGA
|
|---|
| Protein sequence | MKPAELTAFA TARVESRAHP TRGGSVPRQC VLDASGSGAW EKVGGISTIA RMLYHLDKLG
IEEVVVLLSS EHGLKGLERW TGGLRLRQAG KDAHLSLAGN LLSMARLDRR FLYLDAAHLV
DPRLIKALAA ASKTTLTFMD PRDARNGTVR AGLLHVDDLP AWAEEGDAAL ARRSKPLFPS
SIDPYSPEIR GPLTPYFLEV RSREEALEAT RLLIRSQQKH VMDLPAEFID PPFENALTFW
LCRTSISPDM VTLIGGAVAF FVAWLFWHGY FVAGALLTFV VEILDGVDGK LARTKLQFSR
FGRHEDVFDY LCENSWYVAL GVGLSASTPG NWPFFAAALL IFSDTVDNVL YTLAGKWHGK
SIDLYRPFDA AFRRIAGRRN IYGFMFIVGF LAGFPLQTFI LAAVWAAVTA AIHLVRLIQF
GRAVARGCG
|
|---|
| |