Gene Sfum_2896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2896 
Symbol 
ID4458793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3573001 
End bp3573834 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content62% 
IMG OID639703670 
Productphosphonoacetaldehyde hydrolase 
Protein accessionYP_847008 
Protein GI116750321 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01422] phosphonoacetaldehyde hydrolase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0103695 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGATCT TTGTCAGGAA CAAACCTTAC ACGGGCCCGG TCAAGGCCGT GGTCCTGGAT 
TGGGCCGGAA CGACGGTGGA TTTCGGCTGC ATGGCGCCGG TGACGGCGTT CATCGAGGCT
TTTGCCCTGC GCGGCGTGGA GATCTCCGCC TCCGAGGTGC GGGGCCCCAT GGGGCTGATG
AAAATGGACC ATGTGCGTGC TCTGTGCGGC CTTCCTTCGG TGTCGGAACG GTGGCGGGAG
TTGTTCGGGC GCATTCCGAA CGAAGACGAC GTTCGCCTGG TATACGGGGA CACGGTCCCG
TTGATGGTGT TGAGCGTTGC CGACCACGCG GAGCTCATCC CCGGGCTTCT GCCGGCCATC
GGGTATTTCA GGGGGAACGG CATCAAGATC GGCACCTCAA CCGGTTACAC CACGCCGATG
ATGGAGGTTC TCCTTCCCCG CGCCGAGAAG AGGGGATATC GGCCCGATTC GGTGGTGTGC
TCCTCGGATG TTCCCAGGGG CCGGCCGTTT CCCTTCATGT GCTACCGGAA TGCGATCGAT
CTCGAGGTTT ATCCCCTGGA GGCCGTGGTC AAGATCGGGG ATACGGTGAG CGACATCCGG
GAAGGTCTGA ACGCCGGCAT GTGGACCATC GGGGTCTCCA AGTCGGGAAG CGACCTGGGG
CTTACCGAAG CCGAGTTGGA CGCGCTCCCG GCCGACGACC TGAGAAACAG GCTGGCCCTT
GTCGAGTCGC GTTTCCTGGA GGCCGGGGCT CATTTCGTTG TGGAGCACAT CGGACGCTGC
CCGGAAATTA TCGAGGAAAT CAACGATTTA TTGTCTCAGG GCGAAGTTCC CTGA
 
Protein sequence
MEIFVRNKPY TGPVKAVVLD WAGTTVDFGC MAPVTAFIEA FALRGVEISA SEVRGPMGLM 
KMDHVRALCG LPSVSERWRE LFGRIPNEDD VRLVYGDTVP LMVLSVADHA ELIPGLLPAI
GYFRGNGIKI GTSTGYTTPM MEVLLPRAEK RGYRPDSVVC SSDVPRGRPF PFMCYRNAID
LEVYPLEAVV KIGDTVSDIR EGLNAGMWTI GVSKSGSDLG LTEAELDALP ADDLRNRLAL
VESRFLEAGA HFVVEHIGRC PEIIEEINDL LSQGEVP