Gene Sfum_2878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2878 
Symbol 
ID4458810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3554750 
End bp3555640 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content59% 
IMG OID639703652 
Producthypothetical protein 
Protein accessionYP_846990 
Protein GI116750303 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.484673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTCTG CGGCTCTGTC AAAAACTCTT GCATGCATCG TGCTTTCCAT TATGCTTTGC 
AGCTGCGCTC CGTGCCTGCA GAACCTCTGT GCAAAGTCCC CGGCATCCCC ACCAGGCACG
ACCGGGTGCC CTTCGATCGT CAAAAAGAAG CCGCCGGGCG TCTCGGCCTT GATTTCGGAA
GACCGGTTTG ATCCTGCCGA AATTGGCCGT AAGATACTGA GTCACGAAAG TACGTTACAG
TGGACCGGAG AACATAGCGA CGCCACACTG ACCGAATTGG CCCGGCTGTG TTTCATGCTG
GGGGAGTTTG GTGAGAAGAG CGAAAGCGAG CGGTATTTTC AGAAAGGTCG TTATTACGCG
GAGATTCTCT CCAGGGAACA CCCGACGAAG GTGGAGGGCC ATTACTGGCT GGGGATGAAT
CTTGCCGGAC TGGCTGAAAT CGGAGGAGCC GGCCGGGGGC TCCGCCTTGT GCCGGTCATC
GTCGACAAGA TGGAGGTCGC GCTTGACCTG GACGAGGCCT ACGACCAGGG CGGACCTCAC
CGGGTGCTGG GACGCGTGAG GTGCCAGGCG CCGTGTTGGC CGCTTTCAGA GGGCAACATG
GAGAAATCGC TCGAACACCT TCGCACCGCG GTCAGGATCG CTCCCAAGAA CAGCACCAAC
CATCTGTTCC TGGCCGAGAC ACTCTATAAG CTCGGGAAAA CCGAAGAGGC CCTACTGGAA
CTGCAACTGG TGCTTGCATC CTCCTGTCAT TCCGTCTGCC CTGCCGGCCT CCGGGACGAT
TGCCGGGAAG CGTTGCGTTT GCTCAAGGAA TACGGAGCGG AACTGAAACC GGAGTCCGGT
GGTATCGGCG GTGAACACAG TGCTGCCGGG AAACCTCCGG CGGCCAGGTG A
 
Protein sequence
MRSAALSKTL ACIVLSIMLC SCAPCLQNLC AKSPASPPGT TGCPSIVKKK PPGVSALISE 
DRFDPAEIGR KILSHESTLQ WTGEHSDATL TELARLCFML GEFGEKSESE RYFQKGRYYA
EILSREHPTK VEGHYWLGMN LAGLAEIGGA GRGLRLVPVI VDKMEVALDL DEAYDQGGPH
RVLGRVRCQA PCWPLSEGNM EKSLEHLRTA VRIAPKNSTN HLFLAETLYK LGKTEEALLE
LQLVLASSCH SVCPAGLRDD CREALRLLKE YGAELKPESG GIGGEHSAAG KPPAAR