Gene Sfum_2852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2852 
Symbol 
ID4458817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3513355 
End bp3514302 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content68% 
IMG OID639703626 
Producthypothetical protein 
Protein accessionYP_846965 
Protein GI116750278 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC AACGAAGCGA AGGGAAGCCT CCTTACTACC GATTCGACCT TCTCTCCCGG 
GTTCCCGGCC TGGTGCACGG AGTGTTCACC CGCCACGGCG GGGTGAGCCG CCCGCCCTAT
GCGACGCTCA ACGTCGGCTG GAGCAACGGC GACGCACGCG AGGCCGTGCG CGAAAACCTG
GACCGTGTTC GGGACGCCGT GGGCGTCGAC GTCCTCGTAT CCGGGCGGCA GTTTCACGGC
GATACCATTC ACCTGGTGGA CGAGGAGGCG CTCGCGCGGG CGCTCGCATC GTGCCGGCCG
CGGCAGGAAA CGGCTTCCGC CGCTTCGCCC GGCAATGGAG CGGTTTCCGC GTCCGCACCC
GAGCGATCCC GCCTCCGGGA ATCGGATTTT CCGGCCGTCG GCACCGATGC CTCCGACTCG
CCCGCGGCCT CCGCGGTTCT CCCGCCCGTG CTGGTCATGC CGCCCGGCGA CGCCCTGGTC
ACGACGCTTC GAGGCGTCGG GCTCCTCATC AAGGTCGCGG ACTGCCAGTC GATCTTCCTG
GTCGACCCGG TACGCAAGGC CATCGCCAAC GTCCATTCCG GGTGGCGCGG CAGCGTCTGC
GGCATCGCCG GCAAGACGGT CCGGTTCATG CGCGACCGGT TCGGCTCCCG CCCGCGGGAC
ATTCTGGCCA CGGTCGGCCC GTCGCTCGGT CCCTGCTGCG GGGAATTTCG CAACTACCGG
GATGAGCTCC CCGAATCCTT CCATTCCTTC CAGGTGCGCC CGGAATACTT CGACTTCTGG
GCCATCACGC GCCGGCAGTT GCTGGACGAG GGACTGCGCG ACGAACACGT GGAAGCGGCC
GGAATCTGCA CCGTGTGCGA GACCGGCGAA TTCTTCTCCT ACCGCGGCGA ACGCGACACC
GGCCGACTGG CCGCGGTCAT CGGCTGGAAA AGCGACACGG AGGACTGA
 
Protein sequence
MILQRSEGKP PYYRFDLLSR VPGLVHGVFT RHGGVSRPPY ATLNVGWSNG DAREAVRENL 
DRVRDAVGVD VLVSGRQFHG DTIHLVDEEA LARALASCRP RQETASAASP GNGAVSASAP
ERSRLRESDF PAVGTDASDS PAASAVLPPV LVMPPGDALV TTLRGVGLLI KVADCQSIFL
VDPVRKAIAN VHSGWRGSVC GIAGKTVRFM RDRFGSRPRD ILATVGPSLG PCCGEFRNYR
DELPESFHSF QVRPEYFDFW AITRRQLLDE GLRDEHVEAA GICTVCETGE FFSYRGERDT
GRLAAVIGWK SDTED