Gene Sfum_2846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2846 
Symbol 
ID4458844 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3508828 
End bp3509496 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content52% 
IMG OID639703620 
ProductGntR family transcriptional regulator 
Protein accessionYP_846959 
Protein GI116750272 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCCAGG CCGGAGACAA AAGCAATGTG AAATCAAAGA ATCAGGAGGC TTACAGGGCC 
ATCAAGGAAA TGATCCTGGA GCGGCATCTC TTTCCCGGAC AGAAGCTCGT TTACAGAGAT
CTGGAACAAC GCCTCGGCAT GAGCAAGACG CCGATCATCA ACGGCCTGAT GATGCTCGAA
AACGAACATC TCGTTGTGTC TGAAAAGAAT CGCGGTTATC ACATTCGCTA CGTCAACCGC
CGGGAAGCCG AATACATTTA CGATCTCAGG GAAAAACTGG AAGACATCGC CATCGAATAT
GCAATCGCCA ATCACGACAA GAGAGATCTT GCCCTTCTCA AGAGAAAGCT GGTTGCCTAC
CGTAAATATC GCAACGACAC ATTCAATCAG AAGAGGCTGG CCCTCGACGT CGACTTCCAC
GTTCAGATCG CCGGTATGGG CAAGAATCCC TTTTTCGTCC AAATGGTCAG GCAGTATTAC
GAGAGCGTTC ATTTCATGTT CAAGGCCGTC TTCCTGACGC CGAGCCCGGA TCGATTCGAC
CGTTTCAAGG ACGAACACGA GCGGCTCTAC GGCGCCATCA AGAGCAAAGA CCTCGAGGCA
GCCAGGCGTA TCGGGCGGGA ACACATTCGA GGGGCCAGGG AACTGCTGAT CAAGTTGATC
CCCGAGTGA
 
Protein sequence
MVQAGDKSNV KSKNQEAYRA IKEMILERHL FPGQKLVYRD LEQRLGMSKT PIINGLMMLE 
NEHLVVSEKN RGYHIRYVNR REAEYIYDLR EKLEDIAIEY AIANHDKRDL ALLKRKLVAY
RKYRNDTFNQ KRLALDVDFH VQIAGMGKNP FFVQMVRQYY ESVHFMFKAV FLTPSPDRFD
RFKDEHERLY GAIKSKDLEA ARRIGREHIR GARELLIKLI PE