| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2828 |
|---|
| Symbol | |
|---|
| ID | 4458859 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3486466 |
|---|
| End bp | 3487098 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639703602 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_846941 |
|---|
| Protein GI | 116750254 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGGACA CGCAGCCGCT TCCAGGAGCG CGACACGGAG CGGGAGCCGA GCAAGAGCGG
GGTGGTCGGC CTGCTCTGCG CCGCGGGGAC CTTGCCGCGC TGAGAATGGG TGTCAGAGTC
GACAGGGAGG GTCTGCTGCG AAAGGACTTC CAGACAGCCC AGAATGTCAT TGTCGCCGGC
GGAGGCTCCG TGGGAGACCT CGTCTCAAAC CGTTACTTCC TTTCCGACGC TGCATTCCTG
GTCGGATTGG AGGGCGACTT CATGCTCCTC CACCGTCTCC ATGCCTCATT GGCACATCCC
AGGTGGCCCG TCTTTTTGGG TCGGAAGTCT TACGTGCCTT CGATACCGCC ATACATCAAG
AACGGACTCC TCGAAGGCGC AGAGCTGATG AGCGCTCTTG CCAGTTTCAC CCCTCTCATT
TCCGTCGAAG AGCTTGCAGC ACGACGAAAA AGAGTCGAGA GCGGCCGTCG GGTCGAACGG
ACCCGGTTTG TCCTGGAATC GGCTTCCCCT ACCCATGAAA TCAGGCGGGA TCAACCAATG
AGCTTCGCAC TCGGACAGCG CGTTTTTCAC GACAGGTTTG TCGTTACCGA GTACCTGGAT
GTTTTTCGAT GGACCGGCAA AGGAGGGCAA TAA
|
|---|
| Protein sequence | MGDTQPLPGA RHGAGAEQER GGRPALRRGD LAALRMGVRV DREGLLRKDF QTAQNVIVAG
GGSVGDLVSN RYFLSDAAFL VGLEGDFMLL HRLHASLAHP RWPVFLGRKS YVPSIPPYIK
NGLLEGAELM SALASFTPLI SVEELAARRK RVESGRRVER TRFVLESASP THEIRRDQPM
SFALGQRVFH DRFVVTEYLD VFRWTGKGGQ
|
|---|
| |