| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2808 |
|---|
| Symbol | |
|---|
| ID | 4458873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 3461051 |
|---|
| End bp | 3462190 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639703582 |
|---|
| Product | aminotransferase, class V |
|---|
| Protein accession | YP_846921 |
|---|
| Protein GI | 116750234 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
|---|
| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTGA AGCCGATATA CCTCGACTAC AACGCCACGA CACCCATCGA TCCGGCAGTC
GCCCGCGCCA TGCTGCCGTA CATCCACGAA CATTTCGGCA ACCCGTCGAG CCGGCACGCG
TACGGGGTGA CGGCCTGGAA CGCGGTGCAG AAGGCGCGGG GGCAGATCGC CGAAATGCTC
CATTGCGCCC CGGAAGAGAT CGTCTTCACC AGCGGGGGCA CCGAATCCAA CAACCACGCC
ATAAAGGGCA TCGCCTTCGC CAACCGCGCC AGGGGCAATC ACATCATCAC CTCGGTTATC
GAGCACCCGG CCGTTCTCGA GGTGTGCGAT TACCTGGAGT CGCTCGGTTT CCGGGTGACC
CGCCTCCCGG TCGACCGTCA CGGTCTCGTG GACCCGCGCC GGGCGGAAGA GGCCATCACG
CCCGAGACGA TCCTCGTCAC CGTCATGCAC GCCAACAACG AGGTGGGGAC CATCGAACCC
ATCGCGGAGA TCGCCGCCAT CGCGCGTCGC CACGGCGTGC CCATGCACAC CGATGCCGCC
CAGTCCATCG GAAAGATACC GGTCCGGGTG GATGAGCTCG GGGTGGATCT TCTTTCCGTG
GCCGGCCACA AGCTCTACGC GCCGAAAGGC GTCGGTGCGC TCTATGTCCG ATCCGGGCTC
ACCCTCGAGA AATTCGTCCA CGGGGCGGGC CACGAGCTGA ACCGGCGCGC CGGAACGGAA
AACGTGATCC ATATCGTGGG CCTGGGGGAG GCCTGCGCCA TGGTTCATCG GAACATCGAA
AGCTTTGGGG AGCATCTGCG GAAGATGCGC GACAGGCTGG AAAACGGGCT CCGCGTCCGG
TTTAGCGGCC TGAGAATCAA CGGCCACCCC TCCTTGCGGC TGCCGAACAC ATCGAGCGCG
GGCTTCAGGG GGCTCAAGGC CGATCTCGTG CTCTCGCGGC TCGAAAATGT TGCGGCCTCC
GCGGGGGCCG CCTGCCACAG CGACGGCGTG GTGGTGTCCG CCGTCCTTAA CGCGATGGAC
ATACCGCCCG AATATGCCGC GGGGACGATC AGGTTTTCCG TGGGGCGGGC CACGACCGCC
GAGGAGATCG ATCGGGCGGT CGAATACATC GCCGCCGCGG TCGAAGCGTC GACTTCCTGA
|
|---|
| Protein sequence | MNLKPIYLDY NATTPIDPAV ARAMLPYIHE HFGNPSSRHA YGVTAWNAVQ KARGQIAEML
HCAPEEIVFT SGGTESNNHA IKGIAFANRA RGNHIITSVI EHPAVLEVCD YLESLGFRVT
RLPVDRHGLV DPRRAEEAIT PETILVTVMH ANNEVGTIEP IAEIAAIARR HGVPMHTDAA
QSIGKIPVRV DELGVDLLSV AGHKLYAPKG VGALYVRSGL TLEKFVHGAG HELNRRAGTE
NVIHIVGLGE ACAMVHRNIE SFGEHLRKMR DRLENGLRVR FSGLRINGHP SLRLPNTSSA
GFRGLKADLV LSRLENVAAS AGAACHSDGV VVSAVLNAMD IPPEYAAGTI RFSVGRATTA
EEIDRAVEYI AAAVEASTS
|
|---|
| |