Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2805 |
Symbol | |
ID | 4458870 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3456104 |
End bp | 3457006 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639703579 |
Product | glycine cleavage H-protein |
Protein accession | YP_846918 |
Protein GI | 116750231 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.409 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCCA AAAGCAGCGG CGACCGTGGA GTGCGTATTT TCTCAATCAC GGAAAACCAG TGCATCTGGA TGAAGGCCGG TATCGTCAAT TATAAGCTGT GCCAGAATGC TTATGATTGC ACGAGCTGTC CGTTTGACAA AGCCATGAGC AGGAAAGTGG TCGAGAAGCC GACCGCCCTG GTGAGCTGGC AGGACATCAA ACGGCGAAAG CCCTTTTTCG AGAGAGAATG CCGTCACATG CTGACCGGCC GCGTCCAGTT CAAGTTCTGC GCAAACAATT ACCAGTGCAA GGTCTGCGAA TTCGATCAGT TCCTGGACGA GCAGGACCTG GCGACCGCAA CATCTCCGGT CCGAACGGAC AAGGTCTCGG GGTTCGCGCT GGCGAGCGGC TACTACTACC ACGAGGGGCA CAGTTGGGCG CGCATCGAAC ACGGGGGATT CGTGCGCCTG GGTATCGATG ATTTTGCGCT GAGGCTGCTT GGGAGCCCGA CCGGCATCAG CCTCCCGAAA ATCGGTACAC GCTTGAAACG GGGCGAGAAC GGATGGTCCA TCCGCAGGGA GGAGCATTAC GCATCGGTGC TCTCGCCCAT GGACGGCACC GTGATGGCGA CCAATCAAAG TGCCTCGAAG CAGCCCGGAC TCTCTAAAAA GGATCCCTAC GGCGAGGGTT GGCTGATCGT GGTTGACCCA CAAGGTGGCC TCAGGAAACA GACGAAGCAC CTTCTGTTTG AAAAAAGGGC GGTCGCATGG CTCGATGCCG AAGCAAAGAA GCTGGAAGAG ATGGTCATGT CGGTTTACGG AGTTCCTCTT GCCGCCACGG GCGGCGAGAT CGTCGAGGAC ATTTTCGGCA ACCTGTCCCA TCTCCGGTGG GATGACCTCG TGCGCGAGTT CCTACGCACG TGA
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Protein sequence | MEPKSSGDRG VRIFSITENQ CIWMKAGIVN YKLCQNAYDC TSCPFDKAMS RKVVEKPTAL VSWQDIKRRK PFFERECRHM LTGRVQFKFC ANNYQCKVCE FDQFLDEQDL ATATSPVRTD KVSGFALASG YYYHEGHSWA RIEHGGFVRL GIDDFALRLL GSPTGISLPK IGTRLKRGEN GWSIRREEHY ASVLSPMDGT VMATNQSASK QPGLSKKDPY GEGWLIVVDP QGGLRKQTKH LLFEKRAVAW LDAEAKKLEE MVMSVYGVPL AATGGEIVED IFGNLSHLRW DDLVREFLRT
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