Gene Sfum_2805 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2805 
Symbol 
ID4458870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3456104 
End bp3457006 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content58% 
IMG OID639703579 
Productglycine cleavage H-protein 
Protein accessionYP_846918 
Protein GI116750231 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCA AAAGCAGCGG CGACCGTGGA GTGCGTATTT TCTCAATCAC GGAAAACCAG 
TGCATCTGGA TGAAGGCCGG TATCGTCAAT TATAAGCTGT GCCAGAATGC TTATGATTGC
ACGAGCTGTC CGTTTGACAA AGCCATGAGC AGGAAAGTGG TCGAGAAGCC GACCGCCCTG
GTGAGCTGGC AGGACATCAA ACGGCGAAAG CCCTTTTTCG AGAGAGAATG CCGTCACATG
CTGACCGGCC GCGTCCAGTT CAAGTTCTGC GCAAACAATT ACCAGTGCAA GGTCTGCGAA
TTCGATCAGT TCCTGGACGA GCAGGACCTG GCGACCGCAA CATCTCCGGT CCGAACGGAC
AAGGTCTCGG GGTTCGCGCT GGCGAGCGGC TACTACTACC ACGAGGGGCA CAGTTGGGCG
CGCATCGAAC ACGGGGGATT CGTGCGCCTG GGTATCGATG ATTTTGCGCT GAGGCTGCTT
GGGAGCCCGA CCGGCATCAG CCTCCCGAAA ATCGGTACAC GCTTGAAACG GGGCGAGAAC
GGATGGTCCA TCCGCAGGGA GGAGCATTAC GCATCGGTGC TCTCGCCCAT GGACGGCACC
GTGATGGCGA CCAATCAAAG TGCCTCGAAG CAGCCCGGAC TCTCTAAAAA GGATCCCTAC
GGCGAGGGTT GGCTGATCGT GGTTGACCCA CAAGGTGGCC TCAGGAAACA GACGAAGCAC
CTTCTGTTTG AAAAAAGGGC GGTCGCATGG CTCGATGCCG AAGCAAAGAA GCTGGAAGAG
ATGGTCATGT CGGTTTACGG AGTTCCTCTT GCCGCCACGG GCGGCGAGAT CGTCGAGGAC
ATTTTCGGCA ACCTGTCCCA TCTCCGGTGG GATGACCTCG TGCGCGAGTT CCTACGCACG
TGA
 
Protein sequence
MEPKSSGDRG VRIFSITENQ CIWMKAGIVN YKLCQNAYDC TSCPFDKAMS RKVVEKPTAL 
VSWQDIKRRK PFFERECRHM LTGRVQFKFC ANNYQCKVCE FDQFLDEQDL ATATSPVRTD
KVSGFALASG YYYHEGHSWA RIEHGGFVRL GIDDFALRLL GSPTGISLPK IGTRLKRGEN
GWSIRREEHY ASVLSPMDGT VMATNQSASK QPGLSKKDPY GEGWLIVVDP QGGLRKQTKH
LLFEKRAVAW LDAEAKKLEE MVMSVYGVPL AATGGEIVED IFGNLSHLRW DDLVREFLRT