| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2776 |
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| Symbol | |
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| ID | 4458901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3421808 |
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| End bp | 3423097 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639703547 |
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| Product | thiamine biosynthesis protein ThiC |
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| Protein accession | YP_846889 |
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| Protein GI | 116750202 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
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| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00094064 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAACGG AGGAGGACAC AGTGCCTACA CAATTGGATC ATGCAAAAGC AGGTACCGTC
ACTGAGGAAA TGAAACAGGC GGTGAACGAA GAGCCCATCA CGGCCGAGCA ACTGCGTCAG
TCGATGGCGG AGGGGCATGC CGTTTTACCC AGGAATCACA ATCATCCTTA CCCGATTGTG
CGCGCCATCG GTCGCGGACT GAAGACCAAG GTGAATGCCA ACCTGGGCAC CAGCAATGAA
TGCGCCAGTC TTGAAATGGA GCGGGAGAAG CTGGACGCGG CCCTTCGGGC GAAAACCGAT
TCCATCATGG ATCTTTCCAC CGGAGGCGAC CTGGCCGCGT TTCGCCGGTT CTTCCTCGAA
AACTCTCCCG TGATGGTCGG TTCGGTACCC ATTTACTACC TCGCCGCGGA GATGATGGCA
AAGCACGAAT CGCTGGAAAA AATGGACGGT GACCTGCTGC TTCGCAGCAT CGAGCAACAG
TGCAGTGAGG GGCTCGACTA CATCACGGTG CATTGCGGGG TTACACTGGA TTCCGTGAGA
AAACTCGAGG CTTACGAGCG GGTAATGCCC TGCGTGAGCC GCGGGGGCTC CATTCACATG
CACTGGATGC GCCGGAACAA GAAGGAGAAT CCGCTCTACG AGCATTTCGA CGACCTTCTG
GAGATCGCTC ACAAACACGA CGTCACCCTG AGCCTCGGAG ACGGGTTCCG GCCGGGCACC
GTGGTGGACG CCACCGACGG CGCTCAACTC GAGGAACTGA TGATCCTCGG CGAACTGGCC
AGGCGGGCAT ATCGGCGCGG CGTGCAGGTG ATGATAGAAG GCCCGGGACA TGTCCCCCTG
CCCCAGATCC AGGCCAACAT GCAAATCCAG AAGCGGCTCT GCAACGGCGC GCCATTCTAT
ATTCTGGGAC CTCTCCCGAC GGACATCGCG GCGGGCTACG ACCACATCAC GGCAGCCATC
GGCGGGGCCA TCGCCGGGGC TGCGGGGGCG GACTACCTCT GTTACGTCAC GCCCGCGGAG
CATCTCGGGC TGCCCAACGC GGACGACGTC TACCAGGGAG TCATGGCCTG CCGGATCGCC
GGGCACATTG CGGATATCGC CAAGGGGTTG CCCGGCGCTA TCGAGGCGGA CCGCCGCATG
TCCATCGCGC GCCAGAAACT CGATTGGGAT GGGATCGTCA AGGAAGCGCT CGACCCGGAC
CTGGTCAAGA AACGCCTCCA GGTGACCCAG GACCGTGAAG CCTGTACCAT GTGCGGCAAG
CTGTGCGCAG TGAAGATCAG CCGCCAGTAA
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| Protein sequence | MTTEEDTVPT QLDHAKAGTV TEEMKQAVNE EPITAEQLRQ SMAEGHAVLP RNHNHPYPIV
RAIGRGLKTK VNANLGTSNE CASLEMEREK LDAALRAKTD SIMDLSTGGD LAAFRRFFLE
NSPVMVGSVP IYYLAAEMMA KHESLEKMDG DLLLRSIEQQ CSEGLDYITV HCGVTLDSVR
KLEAYERVMP CVSRGGSIHM HWMRRNKKEN PLYEHFDDLL EIAHKHDVTL SLGDGFRPGT
VVDATDGAQL EELMILGELA RRAYRRGVQV MIEGPGHVPL PQIQANMQIQ KRLCNGAPFY
ILGPLPTDIA AGYDHITAAI GGAIAGAAGA DYLCYVTPAE HLGLPNADDV YQGVMACRIA
GHIADIAKGL PGAIEADRRM SIARQKLDWD GIVKEALDPD LVKKRLQVTQ DREACTMCGK
LCAVKISRQ
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