Gene Sfum_2670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2670 
Symbol 
ID4459004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3300753 
End bp3301955 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content62% 
IMG OID639703441 
Productcystathionine gamma-synthase 
Protein accessionYP_846783 
Protein GI116750096 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.445899 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAG ACGACGAACG CCTCCGTCGG ATGGGGAAAC ACACGAAGGC CATCCATGGC 
GGCGGCCTCG AGAAGAAGGT TTACGGGGAG ATTTCGGTTC CCATTTTCCA GACCTCCACG
TTCGGCTTCC CGAGCGCCGC GGAAGGGGCC GCTCGTTTCG CGGGAGAGAG TGACGGCTAC
ATCTACACCC GGCTGAACAA CCCGACGGCG AACGCGCTGG AAGAAGCCAT GACCCTGCTG
GAAGGCGGAT TTGCCGCCAT CGCCTCCTCC ACCGGCATGG CCGCCGTCAC CACGACGCTG
CTCACGTTCC TTAGCCAGGG AGACCACGTC GTGGCCACCG ACTCGATCTA CGGGGCATCC
CGGATGGCCC TGCAGTTCGA ATTTGCCCGG TTCGGCATTG GGGCGACCTT TGTGGACAGC
TCTTCGACAG CCAACATCGA GCGTGCGATT GGCCGAAACA CGAAGGTGAT CTTTTTGGAA
ACGCCCACCA ATCCGACCAT GGCCGTTTCC GATATCCGTG CGGCGGCGGA ACTGGCCCGC
GCCCGGGGCG CCATCCTCGT AGTGGACAAC ACGTTCGCCG GTCCGTATCT CCAGCGCCCC
CTGGAACTGG GCGCGGACAT CGTCGTGGAA AGCCTCACCA AGTTCATCAA CGGCCACAGT
GATGTCCTGG GCGGTATGGT CGTGACCCGG AATGAAGAAC TCCACGCGCA GATCAAGAGG
ATGTTCACCC TGTTTGGAGG CACCATCGAT CCCCATCAGG CATGGCTCAT CCTGCGCGGC
CTGAAAACCC TGCCGTTGAG GGTGGAAAAG GCGCAGGACA ATGCCGGCCG GCTTGCCCGG
TTCCTCAGCG GGCATCCGAA GGTGACCTGG CTGCGCTACC CTGGCCTGCC GGATCATCCG
CAACACGAGG TTGCGAGGCG ACAAATGGAA GGGTTCGGCT CCATGATGTC TTTTGGGGTG
AAAAACGGCC TGGAGGGCGG GATCACACTG ATGAACGCCG TACACCTGAT CACGCTCGCG
GTTTCCCTCG GCGGGATCGA CTCGCTCATC GAACATCCCG CGTCGATGAC TCACGCCGCC
ATTCCCAGGG AGGAACGGGA GCGGGCCGGA ATTCGTGACG AGCTGGTGCG CCTCTCGGTC
GGGTGCGAAG ACTTTGAGGA TCTGCGCGCG GACCTTGAGC ACGCGCTGAG TTGCATTCCC
TGA
 
Protein sequence
MMKDDERLRR MGKHTKAIHG GGLEKKVYGE ISVPIFQTST FGFPSAAEGA ARFAGESDGY 
IYTRLNNPTA NALEEAMTLL EGGFAAIASS TGMAAVTTTL LTFLSQGDHV VATDSIYGAS
RMALQFEFAR FGIGATFVDS SSTANIERAI GRNTKVIFLE TPTNPTMAVS DIRAAAELAR
ARGAILVVDN TFAGPYLQRP LELGADIVVE SLTKFINGHS DVLGGMVVTR NEELHAQIKR
MFTLFGGTID PHQAWLILRG LKTLPLRVEK AQDNAGRLAR FLSGHPKVTW LRYPGLPDHP
QHEVARRQME GFGSMMSFGV KNGLEGGITL MNAVHLITLA VSLGGIDSLI EHPASMTHAA
IPREERERAG IRDELVRLSV GCEDFEDLRA DLEHALSCIP