Gene Sfum_2615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2615 
Symbol 
ID4459054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3225984 
End bp3227525 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content61% 
IMG OID639703386 
Producthypothetical protein 
Protein accessionYP_846728 
Protein GI116750041 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00127521 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.545768 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA AGACGCTCCT GTCGCTTTTC GCACTGCTCC TGAGTTGGAT GCCGGCGTCC 
GCTTTCGCCG AACTGGCCGG CTGGACGCGG GGGAACGTCG CGATCGCCGA TGGTCGGGGG
ATGGGGGGTG CGGGCACCGA TCGCCTTTCG GCCGAGACGT TCTCGGGCGC GCCTGTGGCC
GGCGTGATGG CCGATCCGTC GATGGAAAGT GAGGGCGTCG GTGCCGATCC GGTCCTGTCC
GCTGAGGGAT CGACTGTGCC GCAGGCCGCC GACCCCGGCG GCTGGGTGAG AAAATATCCT
CCCCAACCAC GGGATGTTTC CGCCGGGGCG AGCGACGTTG CCGTGGACGG GGCGGGAAAC
GTTTACATCA CGGGGTGGAT CGGGACCGGC GTCCTGACCG TCAAGTACGA CAACGCCGGC
AAACTCCAGT GGGCGAGAAG GTTCGCGGGG GAAGGGGGCG CGGCGGGTCG CTGCATCGCC
GTGGACGCAT CGGGGAACGT CTATGTCGCG GGATGCATTG GATCGACTCC CGCAGTCGAT
ATCGTCGCGA TCAAGTACAG CCCGGATGGA GTCCATCAAT GGGCCAGATA CTACAACGGC
CCGACGAACC AGGTCGACTG GGCCGCCGCC ATGGCGGTGG ACGGGTCGGG CAACGTCTAT
GTCACGGGGG TTGCCGACCA GGTCGCGCCG GGCAACAGTT ACGTCGTGAC CCTCAAGTAC
TCCGGGAACG GCGAGCTGTA CTGGGCCAGT CGCCACAAGG GATATATAAG CGGTGGTGAT
GCAAGCCGTC GCAGCATGGC GTTGGACGCG GCGGGGAACG TGTACGTGGT GGCCGGACAT
ACCTTGGGTG AAAATCCCTC CTTTTTTCTT CTCAAATACG GCACCGACGG CCGGCTCCGG
TGGAAGAGAC GTTACGGCGG CGTGCCTGAA ATCAAGTGGT GCGTTGGTTT TGCCGTGGCC
GTGGACGACG CGGGAAATGC CTATGTATGC GGACTGACCG TCAGATGGGA CGACGAAACC
AAGTATCTCA TTCACAAGTA TCGTGCCAAC GGCACAAGGC AATGGGAGAG GACACCTCGT
TTTGAACCGT GCACCGGCAC TTGTTGGGCC TCCATTGCCG TCGACGGTTC CGGGAATGTC
TATGTTGTCG ATATTTCGAG GGGGAATGAC TTACTCTGTG GCTTCTCGAC TTCGAAATAC
GATTCGAACG GCGACAGGCA ATGGAAAAGA CGGATTCACG AATCTACCGA AGACCACAGT
ACCAGTGACT GGCCTGCCAT TGCCGTTGAC GGGCCGGGGG CTGTGTACGT CACTGGAGGA
TTGAGCGGGC AGAGCATCGG GAGCGACATT GCGGCTGCAA AATACGATGC GGACGGCCAC
CTTCAATGGT CCAAACGATA CGACGGGACG GGAAGACACG ATACTCCCAG CGGAATTGCT
TTCGACGCGG CCGGAAATGC CTTTGTGACG GGAATATCCT ACCGAACTGA CGCCATTTTC
GAAGCCGTGA CCATCAAGAT CCCCACGGAT GGGGGCAACT GA
 
Protein sequence
MKAKTLLSLF ALLLSWMPAS AFAELAGWTR GNVAIADGRG MGGAGTDRLS AETFSGAPVA 
GVMADPSMES EGVGADPVLS AEGSTVPQAA DPGGWVRKYP PQPRDVSAGA SDVAVDGAGN
VYITGWIGTG VLTVKYDNAG KLQWARRFAG EGGAAGRCIA VDASGNVYVA GCIGSTPAVD
IVAIKYSPDG VHQWARYYNG PTNQVDWAAA MAVDGSGNVY VTGVADQVAP GNSYVVTLKY
SGNGELYWAS RHKGYISGGD ASRRSMALDA AGNVYVVAGH TLGENPSFFL LKYGTDGRLR
WKRRYGGVPE IKWCVGFAVA VDDAGNAYVC GLTVRWDDET KYLIHKYRAN GTRQWERTPR
FEPCTGTCWA SIAVDGSGNV YVVDISRGND LLCGFSTSKY DSNGDRQWKR RIHESTEDHS
TSDWPAIAVD GPGAVYVTGG LSGQSIGSDI AAAKYDADGH LQWSKRYDGT GRHDTPSGIA
FDAAGNAFVT GISYRTDAIF EAVTIKIPTD GGN