Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2560 |
Symbol | |
ID | 4459141 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 3161259 |
End bp | 3162881 |
Gene Length | 1623 bp |
Protein Length | 540 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639703326 |
Product | multi-sensor signal transduction histidine kinase |
Protein accession | YP_846673 |
Protein GI | 116749986 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.948735 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCCAGC ATCACGAACT CCAGATCCTC TTCGACATCT CTTCCGCACT TCACTATTCA CCGCACCTGC AGGACGTACT GCAGCGGGCA CTCATGAGCA TCCTCGGCAC GCTGAAGTTC AAGATGGGGG CGATCTACCT TGCGCGGGAA ACCTCCGACG AGCAATGGCT GCTCGAATTG GCCGCCCATC ACGGTTTCTC AGCCACTCTG TTGAATTGCA TCCAGTTTCT GTCGATACCC ACCAACCTGA TGGACAAATA CCACCATCAG CAGCCGGTCC GCTGGTTCCC GGCCACCAAG ATCACTTTCA CCGCGCTGCG GGAGCGCATG GAAGAGGAGG GAATCGAGGA AATCATCTGC ATTTCGCTGA TGTCTCAAAA GAAGGTGCTC GGCCTGCTGT ACGTGACCAA TGACGGTGCC CTTCAGCTCA AGCCGGACCG GAGCGAATTT CTGACGACCA TCGGCCAGCA GCTCGGCGTG TCCATTCAGA ACGCCCAGTT GTTCGATTCG GTGGAGCGGG CCAAGAGCGA GCTCGAGATC AGCTTTGACG CCATCCAGCA CAGCATCTTC CTGGTGGACC GGCGCATGAG AATATACCGG GTCAACAGGA CGAGCGAGAT GGTTTACGGC AAGGTGGAAG ACCTTCTGGG GAAGAAGTAC ACGCAGATCC TTTACGGCAA GGACCAGCCC CACCTGGAAT GCCCGATCTG GGCCTGCCTC TGGGGCGGGC AGCCGGTGCA GCGCGAAGGG CCGCATCCTC GCTGGGGAGG CTACTATCAC TACTACGCGT TTCCGGTCTT CAATCCGACG GGTTCCCTCG AGCGAGTTGT CTACTACGAA AAAGACGCGA CGGAAGCCCG CAAGCTGGAG CAACGGCTGC AGCAGACGGA ACGGCTGAAG GCGCTGGGGA CGCTGGCCGC CGGCATCGCC CACGAGATCC GCAACCCGTT GGCGACCATC AATTTCAACA CCCAGATGCT GCAAAGGGAA CTGCATCTCG ACGCCGCGCA GCAGCAGATG TTCGATGACG TGTTGAAGGA AATCCGGAAG ATGGACCGGA TTGTTCAGCA GGTGCTGCAT TTTGCACGGC CCAGGGAACC CCAGTTCCAG CCCAACCAGC TCAACGAAGT GGTCCGCTAC TGCATGGACA TGGCCAAGGC CTATCTTGTG AAGGCCAATG TGGTGGTCTG CCTCGACACG AGCGACGGTC TCCCGTCCGT GGTCATGGAT TTCAGCCAGA TATGCCAGGT GGTGATGAAT GTGATCATCA ACGCCATCGA GTCCATGCCC AATGGAGGAA ACCTCACCGT CGCCACCGAA CGCCAGGCTG ACCCGCCTTC CCTGGTGCTG CAGGTGACCG ATACGGGAAC GGGCATCCTT GAAGAAGACA AAGACCGGAT TTTTGATCCA TTCTTCACTC GAAAACCCGA GGGGACGGGG ATGGGGCTGA GCATTTCACG GCAGATCCTG GAGAAACACG GCGCCTTTGT CGACGTCGAG ACCGAACCGG GAAAAGGCAC GACCTTTCGA ATCATCTTCC CCCTCAAACC CGTGGTCCCC CAGATAGAAC CCGCCCCTGA GCCGGGCGAC GCCATTATGG AGAGCAAGCC TGCGATCCAG TGA
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Protein sequence | MRQHHELQIL FDISSALHYS PHLQDVLQRA LMSILGTLKF KMGAIYLARE TSDEQWLLEL AAHHGFSATL LNCIQFLSIP TNLMDKYHHQ QPVRWFPATK ITFTALRERM EEEGIEEIIC ISLMSQKKVL GLLYVTNDGA LQLKPDRSEF LTTIGQQLGV SIQNAQLFDS VERAKSELEI SFDAIQHSIF LVDRRMRIYR VNRTSEMVYG KVEDLLGKKY TQILYGKDQP HLECPIWACL WGGQPVQREG PHPRWGGYYH YYAFPVFNPT GSLERVVYYE KDATEARKLE QRLQQTERLK ALGTLAAGIA HEIRNPLATI NFNTQMLQRE LHLDAAQQQM FDDVLKEIRK MDRIVQQVLH FARPREPQFQ PNQLNEVVRY CMDMAKAYLV KANVVVCLDT SDGLPSVVMD FSQICQVVMN VIINAIESMP NGGNLTVATE RQADPPSLVL QVTDTGTGIL EEDKDRIFDP FFTRKPEGTG MGLSISRQIL EKHGAFVDVE TEPGKGTTFR IIFPLKPVVP QIEPAPEPGD AIMESKPAIQ
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