| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2526 |
|---|
| Symbol | |
|---|
| ID | 4459173 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 3112248 |
|---|
| End bp | 3113234 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639703290 |
|---|
| Product | TGS domain-containing protein |
|---|
| Protein accession | YP_846639 |
|---|
| Protein GI | 116749952 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1163] Predicted GTPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00530169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGCGA ATCTGCCCCC TCCCTACTTT GAAGCCGAGA AACGCTACCG CGAGGCCAGG
ACTGCGGAGG AAAAGATCGA AGCCCTGGAA GAGATGCTCA CGATCATGCC CAAGCACAAG
GGAACCGACA AGCTGCGGGC GGATCTGAGG CGGCGCATCG CCAAAACGAA GACGGAAGCT
CAACAAAAGA AAGGATCGTC GAAACGGGAT GCGTCCTACT CCATCGAGCG GGAAGGCGCC
GCACAGGTCG TGCTCGCGGG CGCGCCCAAC ACGGGCAAGT CTTCGCTCCT GGGGGCCCTG
AGCAATGCGA AGCCGGAGGT GGCGGACTTT CCTCATTCCA CGTGGAAACC CACACCGGGC
ATGGTTCCGT ATGAGAACAT CCAATTTCAG ATGGTCGACA CTCCGCCCAT CACCCGGGAA
TACATGGACC CCTGGATGGC CGATCTCCTG CGCCGCGCGG ATATCCTGGC AATATTGCTG
GACCTCCACG CCGATCCCTT GCAGCAACTT GAGGACACGC TCGCCGTTTT CCGGGGTCTG
AGAATCTACC CGAAAGGGGA AGCCATACCG GCAGACCTGA AAAAAAGTCC CTTCGTCAAG
AAATGCCTGC TGGTTCTTAA CAAGATGGAT GACGACAAAG GCGAAGCGGA CTACACGGCC
TTTCTGGAGC TCTCAGAAAC CCGCCTTCCC TGCGTGGGAG TGTCTGTCCT GGCCGGGCGC
AATTTCCACG TTCTGTTGAA AGAACTTTAT AGCATTTCCG AAATCATTCG TGTATATACC
AAGGTTCCCG GAAAGGAGCC CGACTTCACG GCTCCTTTTG TGCTTCCCGA ACGCAGTCCT
CTCGAGGAAC TGGCGGAGAA GATTCACAAG GATTTCGTGG ACCAGCTGAA GTTCGCCAAG
GTTTGGGGGA AAACCGTGTT TGACGGGCAG ATGGTTCAGA AGGATCACAT TCTGCAGGAT
GGAGATATCG TGGAAATGCA TATTTAA
|
|---|
| Protein sequence | MPANLPPPYF EAEKRYREAR TAEEKIEALE EMLTIMPKHK GTDKLRADLR RRIAKTKTEA
QQKKGSSKRD ASYSIEREGA AQVVLAGAPN TGKSSLLGAL SNAKPEVADF PHSTWKPTPG
MVPYENIQFQ MVDTPPITRE YMDPWMADLL RRADILAILL DLHADPLQQL EDTLAVFRGL
RIYPKGEAIP ADLKKSPFVK KCLLVLNKMD DDKGEADYTA FLELSETRLP CVGVSVLAGR
NFHVLLKELY SISEIIRVYT KVPGKEPDFT APFVLPERSP LEELAEKIHK DFVDQLKFAK
VWGKTVFDGQ MVQKDHILQD GDIVEMHI
|
|---|
| |