Gene Sfum_2513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2513 
Symbol 
ID4459193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp3096640 
End bp3097179 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content54% 
IMG OID639703277 
Productpeptidase M50 
Protein accessionYP_846626 
Protein GI116749939 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAGTG AATTCTACAA GATTTGGAGC TTCTGGGGGA TTCCCGTCTA CATTCACTGG 
TCGACGGCGC TCTTCAGCAT CCTTTTGGCC CTGTCCTCGG TGCTGCTCGG CATTCAGATG
ATTTTTTTCG TCCTGGGGGT GCTTTTTCTT CTGTTGCTTC ATGAGTACGG TCACGCCTTC
TTTGCCAGGC GGTTCGGATA CGAAGTGGAA CAAATCGAGC TGTTCCCCAT GTTCGGAGTA
TGTTCCTACG AAACACCGAA TGACGAGTAT GAGGAGGCGA TCGTCGTCTG GGGCGGAGTC
GTGGCGCAGT TCTCCCTGTT TCTGCCCGTG ATGCTCCTGC TGGTGGTGAT GGGGATGTCT
CCCTTCCCCG TTCTGAATGC CCTGTTGTTC GTGTTCGCGT ACTTCAACGT GATCCTGATG
GGATTCAATC TCATTCCGTT TCCGCCCCTC GACGGCACCA GGGCGTGGAA CCTGCTGCCG
ATCTATGTCC AGAAGCGGGT GGAAATGCGT GAAGAGAAGA AAGGGCGATT CCCGAAGTAG
 
Protein sequence
MYSEFYKIWS FWGIPVYIHW STALFSILLA LSSVLLGIQM IFFVLGVLFL LLLHEYGHAF 
FARRFGYEVE QIELFPMFGV CSYETPNDEY EEAIVVWGGV VAQFSLFLPV MLLLVVMGMS
PFPVLNALLF VFAYFNVILM GFNLIPFPPL DGTRAWNLLP IYVQKRVEMR EEKKGRFPK