| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2478 |
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| Symbol | |
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| ID | 4459228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | - |
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| Start bp | 3057789 |
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| End bp | 3058928 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639703244 |
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| Product | diguanylate cyclase with GAF sensor |
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| Protein accession | YP_846593 |
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| Protein GI | 116749906 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAC CAACCGATCC GGCCGCCGCG CCGGAAAACG TCCTCCCCGT TGATAATGAC
CGTGAAGCGC TGCTGGCCGG CCTCAGTGAG GAAAACGAGG CGCTCCGCGC ACAACTCGAA
GAAGTCGTGG CCACCGCCGC CACCAATGAA CGCATCTGGC GCCACTTCGC TGAAATCGAA
CGCATCCTGT TCCGGACACG CGAGCTCGAC GTGCTCGTCG AGGAGCTTCT CGGAGAGCTC
AAGGAGCGTT TCCAGACCGA CCAGGTGATT CTCTTCCTGT GTCACTCGGA TATCCTGGAG
CGGTTTTTTC CCGACCTCTC CGAAACCAGG GAACCCGTCA GCGCGGGGAC CTGGATCGTG
TCGCTGCCCG TCGAAATCGG CATGGCCCTG TGGAACGTCT CGCCGAAACC GTTCCTGCTT
TCCGAGGAGA ACATCGAGGA GCTTCTGGAA TACCTGCCGG AATCCGCTTC GCCCGTTCGA
TCGGGTGTCA TGATCCCGCT CAGCATCCAC GAAATCCTGT TCGGGGGGCT GTTCCTGGGC
AGCATGGATG CGGATCGTTA CCGTCCCAGG GACGGCACCG ATCTTCTCGA ACAGCTGGGG
ATCAAGATCG CGCTCGCCAT GGACAACTGC CTGACCTATG AAAAGGTAAA GGATTTCGGC
ATAGAAGATC CGGTGACCGG GCTCCTGAAC TTCTTTCAGA TCCACACGGT CCTGGAAAGG
GAATTCCGCC GCTCCCGCCG GACGGGACAG CCCCTGTCGC TGCTCATCAT CGACTTCAAC
TTCGTCCATG AGCTGGAGGA TTTCGACAGC GGCACGGAGG TGTTGAAACA CGTGGCCGGC
CTGCTGAGCG GAATACTGCC CGAGAAGGAG AGTTTTCTGG GTCGATACGG GAGCGACGAG
TTCGTGCTGG TACTGCCCGG CGTGGAGGAG GAGGAGGCGC GGGAGGTGAT TCCCTACCTG
GCCCGGACGA TCCGCAAAGC CCCCTTCAAA CACCGGAATA CCGCCATCCT GATTCAGGCG
ATGATCGGAA CAGCCACTCT GGATGACGGC ATGAAACGGC CCCAGGAAAT GCTCGACAGC
GCCTACGCGG AATTGGCTCG CCTCAAGGCG GTGCATCACC CGGAACCGGC CGAGGAATGA
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| Protein sequence | MMEPTDPAAA PENVLPVDND REALLAGLSE ENEALRAQLE EVVATAATNE RIWRHFAEIE
RILFRTRELD VLVEELLGEL KERFQTDQVI LFLCHSDILE RFFPDLSETR EPVSAGTWIV
SLPVEIGMAL WNVSPKPFLL SEENIEELLE YLPESASPVR SGVMIPLSIH EILFGGLFLG
SMDADRYRPR DGTDLLEQLG IKIALAMDNC LTYEKVKDFG IEDPVTGLLN FFQIHTVLER
EFRRSRRTGQ PLSLLIIDFN FVHELEDFDS GTEVLKHVAG LLSGILPEKE SFLGRYGSDE
FVLVLPGVEE EEAREVIPYL ARTIRKAPFK HRNTAILIQA MIGTATLDDG MKRPQEMLDS
AYAELARLKA VHHPEPAEE
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