Gene Sfum_2415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2415 
Symbol 
ID4459299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2986416 
End bp2987210 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content63% 
IMG OID639703180 
ProductABC transporter related 
Protein accessionYP_846531 
Protein GI116749844 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.805602 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGC AAGCGCACAT CGAGGTCCGC GATCTCACCA TGGCATACGG CAGCTTCGTG 
CTGCAGCGCG ACCTCAATTT CACCGTGCGG CGCGGCGACA TTTTCATCAT CATGGGGGGC
AGCGGCTGCG GGAAGAGCAC GTTGCTGCGC CACATGGTCG GACTGAAAGC GCCGGCCCGG
GGACAGGTGT TCTACGACGG AGTGAGTTTC TGGGAGGCGG AACCCGAGAC GCGCGAAGAC
ATCATGCGGC GCCTGGGCAT CCTCTACCAG AGCGGCGCGC TGTGGAGCTC CATGACCCTT
GCGGAAAACA TCGCCCTCCC CCTCGAGCAG TACACCGAAC TGCCCCCCGA CAGAATCGCG
GAAATTGTGT CGCTCAAGCT CGCCCTGGTG GGGCTTGCGG GGTTCGAGGA TTTCTACCCG
TCGGAAATCA GCGGCGGAAT GAAGAAACGG GCCGGCCTGG CCCGGGCCAT GGCTCTCGAT
CCGGATATCC TGTTTTTCGA CGAGCCTTCG GCCGGGCTCG ATCCGATCAG CGCGAAAAGG
CTCGATGACC TGATCCTCGA GCTGCGGGAC AGTCTCGGCG CCACCATCAT CGTGGTGACC
CATGAACTGG CGAGTATATT CGCCATCGGC AACAATTCGG TTTTTCTCGA TGCGGAGACC
CGGACCATGA TCGCCGCGGG GGATCCTCAC ATACTGCTGG CGGACACCGC GGACCCCAAG
GTGCGCAGCT TTCTCACCCG CGGAGGATCG CACGGCGGGA ACGGCAGACT CAATGGAGAG
ACACACAGGT CATGA
 
Protein sequence
MAAQAHIEVR DLTMAYGSFV LQRDLNFTVR RGDIFIIMGG SGCGKSTLLR HMVGLKAPAR 
GQVFYDGVSF WEAEPETRED IMRRLGILYQ SGALWSSMTL AENIALPLEQ YTELPPDRIA
EIVSLKLALV GLAGFEDFYP SEISGGMKKR AGLARAMALD PDILFFDEPS AGLDPISAKR
LDDLILELRD SLGATIIVVT HELASIFAIG NNSVFLDAET RTMIAAGDPH ILLADTADPK
VRSFLTRGGS HGGNGRLNGE THRS