Gene Sfum_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2348 
Symbol 
ID4459369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2882852 
End bp2884087 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content59% 
IMG OID639703113 
Productglycosyl transferase, group 1 
Protein accessionYP_846464 
Protein GI116749777 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0363579 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTCTT TGGAGGAATA CAGCCGCATT GTCGGCGAGG ATGTGATCGA TCAGATTCAC 
CAGCTTGCGC GTGTCCTGAA AGGGGCCAGG GTGATCCATG TGAACTCGAC GCGGGAAGGG
GGAGGCGTTG CCGAGATCCT GCATTGGCTG GTCCCTTTGC AGGCACAATT GGGCCTGGAG
GTCGACTGGG AGGTCATCAA GGGAGAGCAG GCATTCTATG AATGCACCAA GAGTTTTCAC
AACGCGCTGC AGGGCACTCG GGTGCCGATT CCCGAATCCC TTCTGAGAGT CTACGAAGAG
ACGAACCGGC AGAACGCGGA GGAACTGCGT GAACGGCTCG AGGCCGCCGA CTTTGTCTTC
ATCCACGATC CTCAGCCGGC GCCCTTTCTG AAATTCTGCC CCGATCGAAA AGGGAAATGG
ATCTGGCGCT GTCATATTGA CGTGAGCCGC CCGTACAGGC CCGTCTGGAA GTATCTGCGC
GATTTCGTGG TGGGCTACGA CGCCAGCGTC TGGTCATTGT CCCAGTTTGC GCAGCCGCTG
CCGCATCCCA CCTACCTGAT TCCCCCGAGC ATCGATCCGC TGAGCGAAAA GAACGTGGAC
TTGCCCGCCC ATGAAATCGA GGCCGTTCGG GAGAAGTTCG GCCTGAACGC GGACATGCCC
GTTATCGTTC AGGTCTCCAG GTTCGACCGG TTCAAGGACC CGGTGGGAGC CATTCAAGCG
TGCCGGCTGG CCAAGAACTA TACGCCTTTT CAACTGGTCC TGGCAGGCGG CGGAGCATCC
GACGATCCGG AAGGGGAGAG GATGCACAGG GAGGTGATGG ATGCCGCCGA CGGCGACCCG
GACGTTCGCG TCCTGCTCCT GCCTCCCGAC GCCCATCGAA CCATCAATGC TCTGCAACGC
CTGGCGGACA TCGTGCTCCA GAAATCCACC CGGGAGGGTT TCGGTCTCAC CGTCACCGAG
GCCATGTGGA AAGGAAAGCC CGTGATCGGA GGCGACACTG GAGGGATCCG GCTGCAGGTG
ATCAACCACC ATACGGGCTT TCTCGTCAAT ACGCCTGAAG GTGCGGCCAA CCGGATACGC
TACCTGCTCA AACACCGGGG CAAGATGGAC GAAATGGGCC GGAAGGCCAG ACAGTTCGTC
CTGGAGAATT TCCTCCTCAC GAGACACCTT CGCGAATACC TTACCCTCAT GGTGGCCGTC
ACGCATGAAA CCAAGGAAAG GATCGAGCTT TCCTGA
 
Protein sequence
MRSLEEYSRI VGEDVIDQIH QLARVLKGAR VIHVNSTREG GGVAEILHWL VPLQAQLGLE 
VDWEVIKGEQ AFYECTKSFH NALQGTRVPI PESLLRVYEE TNRQNAEELR ERLEAADFVF
IHDPQPAPFL KFCPDRKGKW IWRCHIDVSR PYRPVWKYLR DFVVGYDASV WSLSQFAQPL
PHPTYLIPPS IDPLSEKNVD LPAHEIEAVR EKFGLNADMP VIVQVSRFDR FKDPVGAIQA
CRLAKNYTPF QLVLAGGGAS DDPEGERMHR EVMDAADGDP DVRVLLLPPD AHRTINALQR
LADIVLQKST REGFGLTVTE AMWKGKPVIG GDTGGIRLQV INHHTGFLVN TPEGAANRIR
YLLKHRGKMD EMGRKARQFV LENFLLTRHL REYLTLMVAV THETKERIEL S