| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2317 |
|---|
| Symbol | |
|---|
| ID | 4459373 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | - |
|---|
| Start bp | 2847545 |
|---|
| End bp | 2848195 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639703082 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_846433 |
|---|
| Protein GI | 116749746 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0600206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGAAA CTGAAACATC CAAAAATATT GAAGCATATC AAGCGATTAA ACAGCTGATC
GTAAACCAGA GACTATTCCC GGGACAGAAG CTCATCTATC GGGATCTGGA AGAGATGTTG
GGGATGAGCA AGACGCCCAT CATCAACAGC CTCATGAGAC TGGAGCAGGA AGGGTTCGTT
GTTTCGAAAA GAAATCGGGG ATTTTTCATG AAAGAGGTCA GCGCCAGGGA GGCCGAGCAA
ATATTCGAGT TGCGGGAACG TCTGGAGGTG ATCTCACTGG AATACGCGGT AAAACATCGA
AACGCCGAGG ACTTGAGGGC ACTGGAAAAG AAGATATCCC TGTATGAAAA TCACAAGGCG
CTTATCTATG ACAGGAAAAG GTGGGAAATC GATACTGCAA TACACATGCA GATCGCGACG
ATGAGCAAGA ACGATTTCTT TACCTCCATG ATCAAGAGCT TTTATGACAG CATTTATTTC
ATATTAAATG TGGTTCATTT GACTCCTCAT ATTAATAAAT TTAATGAAGA GCACCGGATT
CTTCATGCCG CCATCAGGGA TAGAGACGTT ACTGTAGCGA CTGAAGTGAT CAGGTCGCAC
ATACAGGCTG CCGGAAAACT CCTGATAGCG GCGTTATCTG TACGGGAGTA G
|
|---|
| Protein sequence | MQETETSKNI EAYQAIKQLI VNQRLFPGQK LIYRDLEEML GMSKTPIINS LMRLEQEGFV
VSKRNRGFFM KEVSAREAEQ IFELRERLEV ISLEYAVKHR NAEDLRALEK KISLYENHKA
LIYDRKRWEI DTAIHMQIAT MSKNDFFTSM IKSFYDSIYF ILNVVHLTPH INKFNEEHRI
LHAAIRDRDV TVATEVIRSH IQAAGKLLIA ALSVRE
|
|---|
| |