Gene Sfum_2314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2314 
Symbol 
ID4459405 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2843353 
End bp2844102 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content55% 
IMG OID639703080 
ProductABC transporter related 
Protein accessionYP_846431 
Protein GI116749744 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0411] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAA AGATCCTGGA GGTAAGCGGC CTGAACAAGA GCTTTGGGGG TCTCCATGCG 
ACCAGGAACC TGGATTTTGC GCTGTCGGAG GGAGACCTGG ACGCGATTAT CGGTCCGAAC
GGCGCCGGCA AAAGCACATT CTTCAATTTA CTGACGGGCT ATCACCGTCC CGATTCCGGA
AGCATTCTGT TCAATGGAGA GAACATCGCC GGCCGGCTTC CGCACGAGAT CACCCGGATG
GGCATTTCGC GCGCCTTTCA GATCAGCAAC ATATTCCCGA AAATGACCGC TTTCCACAAC
GTGCGGTCCG CCGTGCAGGC TCAAATGGGT CTGGCTTTCA GTCTGTTCAG GTCCGCGGAC
AAAAGTGGCA ACGAGCAGAC GGAAGAAGTG CTTTCCCTGT GCGGCCTGAT TGAAAAAAGG
GAAGCAATGG CCGGGGCGCT GTCCCAGGGA GACAAGAAAA AGCTGGAATT GGCCATCGCG
CTTGCCGGGA AACCAAAGCT TCTGCTTCTG GATGAACCGA CCGCGGGCAT GTCGCTGGAA
GAGACCCAGG AGACGATGGC GCTGGTCGAC CATCTCAACC GGGACCGGAA CATCACCGTC
CTGTTTACGG AACACGATCT TTCGGTTGTA TTCAATCATG CGCGCAACAT CACTCTCTTG
CATTACGGCA GGATCATCAT ACAAGGCATG CCGGACCAGG TGAGAATGAA CGAAACCGCA
CAGAAAGTCT ACTTTGGCGA GCAATACTGA
 
Protein sequence
MKTKILEVSG LNKSFGGLHA TRNLDFALSE GDLDAIIGPN GAGKSTFFNL LTGYHRPDSG 
SILFNGENIA GRLPHEITRM GISRAFQISN IFPKMTAFHN VRSAVQAQMG LAFSLFRSAD
KSGNEQTEEV LSLCGLIEKR EAMAGALSQG DKKKLELAIA LAGKPKLLLL DEPTAGMSLE
ETQETMALVD HLNRDRNITV LFTEHDLSVV FNHARNITLL HYGRIIIQGM PDQVRMNETA
QKVYFGEQY