Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2314 |
Symbol | |
ID | 4459405 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2843353 |
End bp | 2844102 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639703080 |
Product | ABC transporter related |
Protein accession | YP_846431 |
Protein GI | 116749744 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAACAA AGATCCTGGA GGTAAGCGGC CTGAACAAGA GCTTTGGGGG TCTCCATGCG ACCAGGAACC TGGATTTTGC GCTGTCGGAG GGAGACCTGG ACGCGATTAT CGGTCCGAAC GGCGCCGGCA AAAGCACATT CTTCAATTTA CTGACGGGCT ATCACCGTCC CGATTCCGGA AGCATTCTGT TCAATGGAGA GAACATCGCC GGCCGGCTTC CGCACGAGAT CACCCGGATG GGCATTTCGC GCGCCTTTCA GATCAGCAAC ATATTCCCGA AAATGACCGC TTTCCACAAC GTGCGGTCCG CCGTGCAGGC TCAAATGGGT CTGGCTTTCA GTCTGTTCAG GTCCGCGGAC AAAAGTGGCA ACGAGCAGAC GGAAGAAGTG CTTTCCCTGT GCGGCCTGAT TGAAAAAAGG GAAGCAATGG CCGGGGCGCT GTCCCAGGGA GACAAGAAAA AGCTGGAATT GGCCATCGCG CTTGCCGGGA AACCAAAGCT TCTGCTTCTG GATGAACCGA CCGCGGGCAT GTCGCTGGAA GAGACCCAGG AGACGATGGC GCTGGTCGAC CATCTCAACC GGGACCGGAA CATCACCGTC CTGTTTACGG AACACGATCT TTCGGTTGTA TTCAATCATG CGCGCAACAT CACTCTCTTG CATTACGGCA GGATCATCAT ACAAGGCATG CCGGACCAGG TGAGAATGAA CGAAACCGCA CAGAAAGTCT ACTTTGGCGA GCAATACTGA
|
Protein sequence | MKTKILEVSG LNKSFGGLHA TRNLDFALSE GDLDAIIGPN GAGKSTFFNL LTGYHRPDSG SILFNGENIA GRLPHEITRM GISRAFQISN IFPKMTAFHN VRSAVQAQMG LAFSLFRSAD KSGNEQTEEV LSLCGLIEKR EAMAGALSQG DKKKLELAIA LAGKPKLLLL DEPTAGMSLE ETQETMALVD HLNRDRNITV LFTEHDLSVV FNHARNITLL HYGRIIIQGM PDQVRMNETA QKVYFGEQY
|
| |