Gene Sfum_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2310 
Symbol 
ID4459401 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2839044 
End bp2840114 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content57% 
IMG OID639703076 
Productband 7 protein 
Protein accessionYP_846427 
Protein GI116749740 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0330] Membrane protease subunits, stomatin/prohibitin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTGT TGATCGTCCT GACGGTACTG GCCGTGTTCG TTATCTTTTT CGCCGTGAGA 
GGGTTCATGA TCATCCAGCA GAGCGAGACG ATGGTCATCG AACGACTCGG AAGATACCAC
CGGACGCTTT CCTCCGGCAT CAACATCCTC TGGCCCCTCT TCGACAAACC CCGACAGATC
GAATGGCGTT ACGTTCAGAC CGACTCTTCC GGACGGACGT TCGTGCGCAG GGAAACCGTC
AAGCGAATCG ACCTTCGCGA GACGGTCTAT GATTTCCCCA AACAGAGCGT CATCACGAAG
GACAACGTGG TCACCGAGCT GAACGCTCTG CTTTATTTCC AGGTCATCGA CCCCGTGAAG
GCGGTGTACG AGATCGCCAA TCTTCCCGAC GCCATCGAAA AGCTCACCCA GACCACCCTC
CGAAACCTCA TCGGCGAGCT GGACCTGGAT GAGACGCTGT CATCCCGGGA CACAATCAAC
AGCAAATTGA GAGCGATACT CGACGATGCG TCGGACAAGT GGGGGGTAAA GGTCAACCGG
GTCGAACTGC AGGATATCAG TCCTCCACCC GAGATCAGGG TCGCCATGGA AAAGCAGATG
CGGGCCGAAC GCGATCGAAG GGCGGCGATC CTCGAAGCGG AAGGGTTGAA GCAGGCCCGT
ATTCTTGAAG CCGAGGGAGC GCGGACCGCG GAGATCAACA AGGCCGAAGG GGAGAAGCAG
GCCCGCATCC TGGTTGCCGA AGGGGAGGCG CTCGCAAGAG TCAGAACCGC CGAAGCGGAA
GGCATGGCGA TCAAGATGAT CACGGAGGCC GTTGCCTTGA GCAAAGGCGA CCCCACCAAC
TACCTGATCG CCGTCAAGTA TATCGAGACG CTTAAGGAAA TGGTGTCCGG ACAGAACAAC
AAAGTGGTCT ATCTGCCGTA CGAAGCGACG GCGGTTCTCG GTTCCATCGG CGGGATAAAG
GATATGCTGG AAACGATGCG GCCGATGCAG AACTTTCCCG GGAAGCCCGC GAAGGAATCG
CCTCGTCAGG CCGGTGACGA TTCCGACCTC ATCATTTCGA ACATCGAGTG A
 
Protein sequence
MGLLIVLTVL AVFVIFFAVR GFMIIQQSET MVIERLGRYH RTLSSGINIL WPLFDKPRQI 
EWRYVQTDSS GRTFVRRETV KRIDLRETVY DFPKQSVITK DNVVTELNAL LYFQVIDPVK
AVYEIANLPD AIEKLTQTTL RNLIGELDLD ETLSSRDTIN SKLRAILDDA SDKWGVKVNR
VELQDISPPP EIRVAMEKQM RAERDRRAAI LEAEGLKQAR ILEAEGARTA EINKAEGEKQ
ARILVAEGEA LARVRTAEAE GMAIKMITEA VALSKGDPTN YLIAVKYIET LKEMVSGQNN
KVVYLPYEAT AVLGSIGGIK DMLETMRPMQ NFPGKPAKES PRQAGDDSDL IISNIE