| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2308 |
|---|
| Symbol | |
|---|
| ID | 4459399 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 2837511 |
|---|
| End bp | 2838437 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639703074 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_846425 |
|---|
| Protein GI | 116749738 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAGACAC AAAGAATCCA GGGTTTGACC CTTGCGCTGG CGGCAGCCGG ATTTGCCACG
ATATACGACA TCATCACCCG TTTCGGTTCC TCGGGAATCA CGCCCTGGCA GATCCTTCTG
ACCAGGGCCG TTTTCGGACT GGCTCTCACA GCCGTCCTGG CCCGGGCTTT CCATCTGAAT
CCGCTGGGCA GAAATCGTCC GGGCATGCTG CTCACGGGAC TCATTCTCGT CGTGGGAGTG
CTTTGCTTTA TTTTCGCCCT GTTTCGCCTG CCGGTGTTCG AGGCGGTTTT GCTTCTGTAT
CTCTATCCCG TCTTCGCCGC CCTCTTCTCG CCGTTCCTCG TCGATGAACG GATCGGTCTG
AAGCTGTGGA CCCTGATCGC CGTCGCCTTC TGTGGAACCG CATTTGTCCT GTGGCCGCAG
GGCGCCGTCT CGGATGTCAA CGGGGGACAC CTCCTGGGGG TTGGATCGGG TTTCTGCCAC
GGGCTTGCCC TGACTCTGGT GCGCCGGTTC AGCAGGCACA ACGGCGCCGT GACCCCATTT
TTCTACTTCT GCGCGGTCGG GGCGGTGGTC TCGGCGGTCG CCGTGGGTCT CAGCCCGGCA
TCGACGCCCT TGAGCCTCGA GGGTTGGGCG GCTCTGGGCG GCATCGCCGT CACCGCGGGC
CTTGCGCAGC TTTGCATGAT CAAATCGGCG ACCTGCATCT CCTCCGCGGA AGTCGGAATC
GTCGGGATGT CGGAAATCGT CTTCGGCGGC CTTGCGAGCT ACGTGCTGTT CAGTGAAGCC
GTCGGCCTGC GTCAGATCCT GGGCGGGGTC CTGGTCGTCT CCAGCGCGGT CGTCCTGGCC
CTCGACACCA CCCGGGATGC GGCGGTCCGG CGGGAGCCGG CGCGAGCCCG TCCTCCCCGG
CGAATTGGGG GACATTCCGT CGATTGA
|
|---|
| Protein sequence | MKTQRIQGLT LALAAAGFAT IYDIITRFGS SGITPWQILL TRAVFGLALT AVLARAFHLN
PLGRNRPGML LTGLILVVGV LCFIFALFRL PVFEAVLLLY LYPVFAALFS PFLVDERIGL
KLWTLIAVAF CGTAFVLWPQ GAVSDVNGGH LLGVGSGFCH GLALTLVRRF SRHNGAVTPF
FYFCAVGAVV SAVAVGLSPA STPLSLEGWA ALGGIAVTAG LAQLCMIKSA TCISSAEVGI
VGMSEIVFGG LASYVLFSEA VGLRQILGGV LVVSSAVVLA LDTTRDAAVR REPARARPPR
RIGGHSVD
|
|---|
| |