Gene Sfum_2288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2288 
Symbol 
ID4459414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2810151 
End bp2811479 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content66% 
IMG OID639703054 
Productaminotransferase class-III 
Protein accessionYP_846405 
Protein GI116749718 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGA TTCCGGGGAA CGTGTTTTCG AGGCGGCTCG ACATGGCTCT GCCGGTGGCG 
GACGGAGCCC GCGGGCTGTG GATTGAAGAC CGGGACGGCA ACCGGTATCT CGATGCGAGC
GGGGGGCCCC TGGTGGTCAA CGTCGGCCAC GGGCGGGAGG AAATCGCCCG AGCCATGTAT
GACCAGGTTT TGCGGTGCGA TTACGTGCAT CCCACCATGT TCACCACCCG GGCGGTGGAG
GACCTGGCGA AAGCGCTGGC CGCTCACGCG CCTCCGGGCA TCGGACGATT TTACTTTCTT
TCCGGAGGGG GGGAAGCCGT CGAGACCGCG ATCAAGCTGG CGCGGCAGAT CCACCTCGAG
AACGGCCGGT CCGGGCGCAT CCGGCTCATT TCCCGCTGGA AATCGTATCA CGGTCTTACC
CTGGGCGCGC TGGCGGCAAC TGGGAGGACC ACGTTCCGGG CCCCCTTCGC TCCCCTGCTC
ACCGAGGTGG AACACATCCC GGCCCCATAC TGCCTGCGCT GCTCTTTCGG TTCGACCTAT
CCGGAATGCG GCCTGCGCTG TGCCCTGGCC CTCGAAGAGA CCATCCAGAA CCTCGGTCCC
GATACGGTTT CGGCTTTCCT GGCCGAAACG GTGAGCGGAG CGACCATCGC CGCCGTGCCC
CCGCCTCCGG GCTATTTCCC CCTCGTGCGG CGGATCTGTG ACCGCTACGG CGTGCTGTTG
ATCCTGGACG AGGTCCTGTG CGGATTCGGC CGGACCGGCC GATGGTTCGC GAGCGAGCAC
TACGACGTCG TCCCGGACAT CGTCACGATG GGCAAAGGAT TGGCTGGAGG CACCATCGCC
CTGTCCGCCG CGGCGGTTCG CGACAGCCAT TTCGAGGCCA TTCGCAACGG CAGCGGCGGG
TTCGTCCACG GCGGGACGTT TTCGCACCAC AGCGTGGCCG CCGCCGCCGG GCTCGCGGTG
ATCGGCATCA TGGAGCGGGA GGGACTGGTG GAACGGGTCG CCCGACTGGG CGAGGTCCTC
GGAAAGAAGC TGCGCGCGGC CCTGGCGGAT CATCCCAACG TGGGCGAAGT GCGCGGCATC
GGCTTTCTGT GGGGGGTCGA ATTCGTGAAG GACAGGAAGT CCCTGCAGCC CTTCGCGCGC
GGCGAGAAAT TCGTGGAACG GCTGTGGCGC AACGTTATGG CGCGGGGGGT CCAGTTGTAT
CGCTCGACCG GGCTGGCCGG AATCGACGGC GATGCGCTGG TGATCGGCCC GCCCTACATC
ATCGAGGAAG ACCAGTTGGA CCTGGTCGTC ACGGCGTTGG CTGAGGGACT CGAACAGACC
CTGGCATAG
 
Protein sequence
MNAIPGNVFS RRLDMALPVA DGARGLWIED RDGNRYLDAS GGPLVVNVGH GREEIARAMY 
DQVLRCDYVH PTMFTTRAVE DLAKALAAHA PPGIGRFYFL SGGGEAVETA IKLARQIHLE
NGRSGRIRLI SRWKSYHGLT LGALAATGRT TFRAPFAPLL TEVEHIPAPY CLRCSFGSTY
PECGLRCALA LEETIQNLGP DTVSAFLAET VSGATIAAVP PPPGYFPLVR RICDRYGVLL
ILDEVLCGFG RTGRWFASEH YDVVPDIVTM GKGLAGGTIA LSAAAVRDSH FEAIRNGSGG
FVHGGTFSHH SVAAAAGLAV IGIMEREGLV ERVARLGEVL GKKLRAALAD HPNVGEVRGI
GFLWGVEFVK DRKSLQPFAR GEKFVERLWR NVMARGVQLY RSTGLAGIDG DALVIGPPYI
IEEDQLDLVV TALAEGLEQT LA