Gene Sfum_2204 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2204 
Symbol 
ID4459505 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2701266 
End bp2703200 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content58% 
IMG OID639702970 
Productserine phosphatase 
Protein accessionYP_846321 
Protein GI116749634 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2208] Serine phosphatase RsbU, regulator of sigma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.206885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAACC GCGGTCTCGC TTTCAAGTTG ATGGTTTTCA TCCTCGCCAG TAGTGCCTGC 
ATTTTCAGCG CGGCCTTTTC CTACAATTAC TATTCGTCGA AGAAGACCGT CATCAGGGAT
GTGGAGGAAA ATGCCAGGAA TCTTGCACGA TCGACGGTGT ACCGGATCGA GAGCGTGCTG
CAGGGAGTGG AAAAGGTCCC CCTGAACATG GCTTCCGTCA TTGGGCGGTA TCCCTACGGC
GTGGTCGATA TCTTCCACCT GGTGCAGTCG GCCGTTGCCA ACAACCCGGA AGTCTACGGC
TCCATAATTG CCTACGAGCC GTACAACTAC GAACCGGATA CCGAATACTT CGCGCCCTAC
TGCTACCGGG GGAGCAACGG CAGTATCAAG TCCGAAGTCC TCGGCGGCGA GGACTATCGG
TACTTCGTCA TGGACTGGTA CCAGATTCCC AAGTTGCTCA AAGAGGTGGT CTGGAGCGAG
CCGTATTACG ATGAGGGGGG CGGCAACATC GTCATGGCCA CGGTTTCCGT TCCATTTTAC
AAGGAAGCCG ACGGCGAGAA GGATTTCCAG GGCATCGTGA CGGCCGATAT CTCACTGTCG
TGGCTCACGG AGATCCTGTC CTCGGTGACG ATATACCGAA CGGGGTATGC CTTCGTCATC
ACGCGCAACG GGGTCTTCGT CACGTATCCG GACAACGGTT TCATCATGCG CAAGAGCATC
TTCAGCATTG CCGAGGAGAA TGCGGATCGG AACCTGCGCG ACATCGGCAG AGACATGATC
GCGGGCCGCG AAGACTTCAT TCCCCTGGTG GACTTCGCTT CCGGGAAAAA ATCCTGGATG
TACTACGCTC CTCTGCCTTC CAACGGCTGG TCCGTCGGAG TCATTTTCCC CGAGGACGAG
CTGTACGCGG ATGTCTGGGA CCTGGGAAAG GAAGTGGTCA TCATCGGCCT GATCGGTTTC
CTGTTCCTCT TCTTCACGGT GGCGATGATC TCCCAGACCA TCACCAGGCC GCTCCGTTTT
CTGGACGCGA CCACGCACGA GATTGCCAAA GGCAACCTGG ACATCGAGCT TCCGGAACCG
AGGAGCAACG ACGAAATCGG CCGCCTGACC CGTTCTTTCA AAGAGATGAA GTCGGCGCTC
AAGGAGTATA TCGCCAACCT CGCCGAGACC ACCGCATCCA AGGAGCGGAT GGAGAGCGAG
CTGAAGATCG CCCGGACCAT TCAGATGAGC TTTCTGCCCA AGCGGTTCCC GTCGCTTCCC
GAAACGGAGG TGGTCGAAGT TTTCGCCACT CTCGAGCCGG CCAGGGAAAT CGGCGGGGAT
TTGTACGACT TCTTTTTTCT GGACCGTGAC CATCTCTTCT TCGTTGTGGG CGACGTTTCG
GGAAAAGGCA TTCCCGCCGC TCTTTTCATG GCGGTGAGCA AGACCCTGTT GAAAGGGGTG
ACCGAGCTCG GCATGGAACC GTCGGAGGTC CTGGAGCGGG TGAATGCCGA GCTTTGCATC
GACAACGAAT CCATGATGTT CGTGACGGTG TTTTGCGCCG TTCTCGACCT GAGAACGGGA
GAGCTGCGCT ATTCCAACGG AGGCCACGTG CCGCCGGTCC TGCTGCGCGA GGGAGGGGAG
CCGGTCTGGG TGGAAATCCC CCCCGGGGTT TTTCTGGGAA CCTTCGATGA TGCCCGGTAC
AAGACCGGGA CATTGAGTCT GATCCCCGGT GACACGATCC TGGTGTATAC GGACGGGGTC
TCGGAAGCGA TGGATGCCCG GCGTGAGCTG TACACGGGCG CCAGGCTCAT GACGGCGCTC
CGGTCCGTCC CCGACGGGTC GCCGGAAACG GTCGTGAGGG AGGTCCTCGA GTCCGTCCGG
GATTATTCCT CCGGAGAGCC CCAGGCCGAC GACATCACGA TCCTGGCCGT TCGATTCAAG
GCATTCAAGA CCTAG
 
Protein sequence
MKNRGLAFKL MVFILASSAC IFSAAFSYNY YSSKKTVIRD VEENARNLAR STVYRIESVL 
QGVEKVPLNM ASVIGRYPYG VVDIFHLVQS AVANNPEVYG SIIAYEPYNY EPDTEYFAPY
CYRGSNGSIK SEVLGGEDYR YFVMDWYQIP KLLKEVVWSE PYYDEGGGNI VMATVSVPFY
KEADGEKDFQ GIVTADISLS WLTEILSSVT IYRTGYAFVI TRNGVFVTYP DNGFIMRKSI
FSIAEENADR NLRDIGRDMI AGREDFIPLV DFASGKKSWM YYAPLPSNGW SVGVIFPEDE
LYADVWDLGK EVVIIGLIGF LFLFFTVAMI SQTITRPLRF LDATTHEIAK GNLDIELPEP
RSNDEIGRLT RSFKEMKSAL KEYIANLAET TASKERMESE LKIARTIQMS FLPKRFPSLP
ETEVVEVFAT LEPAREIGGD LYDFFFLDRD HLFFVVGDVS GKGIPAALFM AVSKTLLKGV
TELGMEPSEV LERVNAELCI DNESMMFVTV FCAVLDLRTG ELRYSNGGHV PPVLLREGGE
PVWVEIPPGV FLGTFDDARY KTGTLSLIPG DTILVYTDGV SEAMDARREL YTGARLMTAL
RSVPDGSPET VVREVLESVR DYSSGEPQAD DITILAVRFK AFKT