Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2193 |
Symbol | |
ID | 4459494 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2687594 |
End bp | 2689372 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639702959 |
Product | hypothetical protein |
Protein accession | YP_846310 |
Protein GI | 116749623 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGGCATC GATGCAGCGT CAACCTCAAT TCGGATGTTT CTATTATGAC TTTTCCCACC AATGGTTCAT GGACGGATAA GCTGTGCGCC GGGAACAAGA TCGCGCGCAC GGTTTTCGCC GCGGTGTTTC TGATCGCCGC CGGGATGGTG TCCGTCGCCC ATTCCGTGCC CGTATCCAAC AACGTTCCGC TCGACCACTG GTCCTACGGG GCGCTGGACA AGGTGGCCGG GTTCGGCCTC ATTCGCTCGG ACCTGCACGG GATCAGGCCG TACACCCGGA TGGAAGTGGC GCGGCTGGTG CACGAGGCCC TGGCCGTCCG GGAAGAGAAA TCGCTCAAGC TGCCGCCGCT CATCGAGCAC TTCCTGGAAC GTTTTCAGCG GGAATTCCGC GAGGAGCTCA CCGTTTACGG AAGGGGCGAT TCGGACGGCG CGGCGATCAT GACGATCAAG CCCATCGAAG AGGCGCAGGC GCGCTATGCC TTCGTGGACG GGAAGCCTCG CGATTTCGTC AATTTCGGGA AGCGCAACGG GCAGTATCCC TGGAGCCCGA GCGGGATCGT CGCGTCGGAG AAAACTCCGC TCCTGTACGG GAACGAGGGA ATCGTCTACG GCGAGGGGAG CAATTTCTCT TTGCAGTTTT CTTCGAGCGC GAAACTGTGG GACCTGTTCT CCGGGTACGT GGAACCGATC CTGATCGTCC GGCAGAACGA GGATCCGGGC CGGAGCCTGG ACGGGTTGAG CGGCGGGCGG GAGCACGGAA GCCTCGGCGC ATTCGACCGG GTGGGGTTCG ATCTGCACAA GGGGTACGTG AAGTTTTCGC CGTGGAACGT CGAAATCGAG TTCGGGCGGG ATTCCATGTG CTGGGGCCAG GGATACGCCG GCAGTCTCAT CATGGGCAAC AACGCGGGCC CGCTCGACAT GCTCAAGATC ACCAACCCGA CCAACACGCT CCTCCCCTGG GTGTTCCGGT ACCTGGGGCC CTTCAAGTAC ACGGTCTTCG TCGCGCGGCC GGACGATTAT CTCAACCCGT TGAATCCCCT GCTGAGCGGG GGGAGCGTCA ACTTCAAGCC GCTGCCCTGG CTGGAGCTGG GTTTCGAGAC GGCTTTCCTG ATGAACGGCG AGGACCGGCC GTCGACGTCC TTGTCCAACT ACTTGAAGGC CCTGTTTGGG TTCGGATTCG GTCAGCCGAA CGAGATCGAC CAGGTGGGGT CTTTCGAGGC CAGGTTGCGC CTGCCGTTCC TGTGGAACGC GGAGCTTTAC CTGGAATACG GGGGGGAGGA CAGCGGCGGG GAGGAGTTTT TCGAGGAATG GTTCGGGTTC GGGGATGTCG GGTATTTGAC CGGTATCTAT TTACCCAGGA TCACCCCGGA CGGGAAAACC GATTTCCGGT TCGAATTCGC GCGGACCGCC CACCGCGTCG ACTCGACGCC GGGGTTCTGG TACGGGCACA CGAGTTATCG ATGGGGATAC ACCAACGACC AGATGATCGT GGGGCACCGC ATCGGCCCCG ACGCGATCGA TTATTTCGCG CGCGTGACCC GTTACCTGAG AAACGATCTG CGCGTGGGCG TCGACTTCGA GCACATGGTG CGGGGCGTTT CGCTCAACGT GGTGGAGGAG GAGAGCAACG GGTTCGGCGC GGACGTCGCC TGGGATATCG ATTCGCGATG GAGCGTGGCG GCGCGCTACG CATTTCAGGA CATATCCAAC TTCAACCTGG TCCGGGGCGA CGACCAGGCA AACCACCTGC TCGTGACCGG CGTGAAGTTC AGCTTCTGA
|
Protein sequence | MGHRCSVNLN SDVSIMTFPT NGSWTDKLCA GNKIARTVFA AVFLIAAGMV SVAHSVPVSN NVPLDHWSYG ALDKVAGFGL IRSDLHGIRP YTRMEVARLV HEALAVREEK SLKLPPLIEH FLERFQREFR EELTVYGRGD SDGAAIMTIK PIEEAQARYA FVDGKPRDFV NFGKRNGQYP WSPSGIVASE KTPLLYGNEG IVYGEGSNFS LQFSSSAKLW DLFSGYVEPI LIVRQNEDPG RSLDGLSGGR EHGSLGAFDR VGFDLHKGYV KFSPWNVEIE FGRDSMCWGQ GYAGSLIMGN NAGPLDMLKI TNPTNTLLPW VFRYLGPFKY TVFVARPDDY LNPLNPLLSG GSVNFKPLPW LELGFETAFL MNGEDRPSTS LSNYLKALFG FGFGQPNEID QVGSFEARLR LPFLWNAELY LEYGGEDSGG EEFFEEWFGF GDVGYLTGIY LPRITPDGKT DFRFEFARTA HRVDSTPGFW YGHTSYRWGY TNDQMIVGHR IGPDAIDYFA RVTRYLRNDL RVGVDFEHMV RGVSLNVVEE ESNGFGADVA WDIDSRWSVA ARYAFQDISN FNLVRGDDQA NHLLVTGVKF SF
|
| |