Gene Sfum_2185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2185 
Symbol 
ID4459094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2676963 
End bp2678258 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content57% 
IMG OID639702951 
Producthypothetical protein 
Protein accessionYP_846302 
Protein GI116749615 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.483086 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTCTGC TCAAGAATAC CATAACCGTC GTAGGGATGC GGATTGTCCT GACACTGCTG 
ATTTTTCTGG CGGACATCGT TGCCTCTCGC TATCTCGGCG TGGCGCTGAA GGGGGATTAC
TTCTTCCTCG CATCCAGTGT GCTCTTGGTG GGCACGTTGC TTACCGGCGG AATGCATCTC
GGGAATGTTT ACTATCTGCG GTCCATTCCC CTGAGTCAAC TGTCCGCGAA TACCCTGATT
TACGTCTCCG GGGTGGCACT GATCGTCTTT TGTGCGGGCT TTCCCCTGGC CTCGAAGATT
CCCGTCCTGG CACGAGGCAA CCAGGCTCTG ACCGTCATAT TCATTTTCTG CCTGGTGCTG
GATTGCACTT GTACCATTTT CATGAACTTT TTCATTGGCC TGGGCGAGCT TGCCCGATAT
GCCATGGTCC GCATCGTGCG CCGCGGCATG TTTCTGGTCC TGCTTCTGGG GGCATGGCTG
ATCTGGGAAC CTTCGCTTGA ACTGACGCTG TTCTTTTATC TGGCAACCAC CGTCATAGCC
CTCGCGCTGA CGGGATACCT TCTTCCTCTG CAGTCCGGCG TCTTCCGCTG CCAGTGGCAA
TCCCTGGGTA GGTGCCTCTC CTATGGCCTC CGTAGCCAAG CATTGGTTTC AGTGGACATG
GGTACCCAGC GTATCAACAC AATCGTCTTG GGATTCTGGG CAACTTCCAT GGATAACGGG
CTGTTTTCGG TCGCCCTCAA TTTCGGGCAG GCCCTGTGGC TGCTCTCCGG TGTTCTGTAT
GTTGTCGTCC AGGCAGGAGT CTCCCACTCA GCCGAAAAGC AACTGGCCGA CCTCGAGAGA
CTCTGCCGCC ACTCCCTCTT TCTCATGGTT ATCGGCGGGT TCGCCCTGGG CCTTCTGGCA
GACCCCTTGG TCCGGCTGGT ATACGGCGCT GAATTCGAGG GCTCCGGTGC GCTCCTCCGG
CTTATGCTGC CGGGATTCGC CGGCTATTCC CTCTATACCC TTTGCTCCAG TTTCATGATC
GTCAACGGCC GGGCTGGGAC GGCCTTACTG GGCAGCTTGG GAGGCCTCCT GGTAAACGTC
ACGATTGGGC TGGCCCTTAT TCCCCACATG GCCGCCACTG GCGCCGCCAT GGCATTGAGC
TGGGGCTACC TGAGCGGGAC TATGCTGCTG ATGTTTCTCA TATGCGTGAT CTTCAAGGCC
AGACCTTCCT CCCTTTTATT TTTGAGACGA GCAGACCTCC AGCACCTGGC ATCCGTGCTC
TCTGGCTGGA GGAAATGTAT CGGGCGAGTG CCTTAA
 
Protein sequence
MGLLKNTITV VGMRIVLTLL IFLADIVASR YLGVALKGDY FFLASSVLLV GTLLTGGMHL 
GNVYYLRSIP LSQLSANTLI YVSGVALIVF CAGFPLASKI PVLARGNQAL TVIFIFCLVL
DCTCTIFMNF FIGLGELARY AMVRIVRRGM FLVLLLGAWL IWEPSLELTL FFYLATTVIA
LALTGYLLPL QSGVFRCQWQ SLGRCLSYGL RSQALVSVDM GTQRINTIVL GFWATSMDNG
LFSVALNFGQ ALWLLSGVLY VVVQAGVSHS AEKQLADLER LCRHSLFLMV IGGFALGLLA
DPLVRLVYGA EFEGSGALLR LMLPGFAGYS LYTLCSSFMI VNGRAGTALL GSLGGLLVNV
TIGLALIPHM AATGAAMALS WGYLSGTMLL MFLICVIFKA RPSSLLFLRR ADLQHLASVL
SGWRKCIGRV P