Gene Sfum_2145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2145 
Symbol 
ID4459534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2622045 
End bp2623442 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content61% 
IMG OID639702911 
Productallantoinase 
Protein accessionYP_846262 
Protein GI116749575 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0044] Dihydroorotase and related cyclic amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATTCGA TTGATCTGAT CGTGCGAGGC GGCACGATTT ATGCCGCGGA CGGACATTAC 
CGCGCGGACA TTGCCGTGAA GGATGAAAGG ATTGTCGCCA TCGGGCATGC GGAGCTCTTT
CCCCGGGCAA GAACGGAAGT GGACGCAACC GGTCTGTGCG TCCTGCCCGG GCTGTGGCAC
ACGCACTGCC ATTTTCGAGA GCCCGGGCAC ACGGACAAGG AAGACTTTAC ATCCGGGACC
AGAGCGGCGG CGGCGGGGGG AATCACTTTT TGCATCGACA TGACCAACAA CACTCCCCAT
CCGTCGACCC TGGAGGACTT TCAGATGAAG CTGGGGATCG CCCGAGAGAA AGCCTGCGTC
GATTTCGGGC TTTACGGGGC GGGACTCTAC CCGGATCAGA TCGGCAAGCT GGCCGGTGCC
GGAGCGATCG GCATCAAAGT CTTCAACACG CGGCACATCA AGGAAGTCTA TCCGTATATC
AGCGAGCTCG GCGTACTCAA TCACGGCCTG CTCTACGAGA TCTACGAAGC GGTTGCGGAC
ACGGGCCTGA TCTGCTCCGT GCATCATGAC GATCCCGACT GGTGCCGGAG GATGACTTTC
CGAGAGTACA TCAACGTAGG GAAGACGGAA AACCGGCACT ACATGGAGGC CTATGAAAAG
GGTTACATGT ACGGGCACGG CATGGTGGCC GGCCTGGCTG CTTCGCTTTA CTACGCGGAT
TTGGCCGGGG TCTCCCTTTA TGTCCTTCAC CTGGGGGTCA TGCCCCCCGG TGCCTACGAG
ATGATCCGGC ACGCCAAGGT CGAGCTCGGG CAGGAAGTCT ACGCCGAGCT GGAGATTTCC
ACGGCACTCA TGACCAGGAA ACAGGCGGAA AAGGTGGGGC CGTGCACCTA TGTCTGGGCG
TACAGCCCGG AGACCGCCTG GGACAGCCTG GAGAGCGGCG TCACGGACGT GATCGTGGGA
GAGCATGCCC CGCATACCGT CGCGGAAATG GAACCCGGTT GGAAGGACAA TTTCTCGGTC
CCGCTGGGCA TCACGGGGGC GCAGGAATTC ATCCCGCTCA TGCTCACCCA GGTGAACAAT
GGAACCCTGA GGCTCGAAGA CCTGGTCTGG TACTGTTCCG AAAGCCCGGC CCGGATTTTT
GGCGTTTACC CGCGCAAGGG GACGATCTCC ATCGACGCGG ACGCCGATTT CACCATCGTC
GACATGAATC GCCGCAAGAT CCTGACGGGC GCGGACATGT ACACCAAGTC CCGGACCACC
TCCTGGGAAG GAATGGAAGT CACGGGCATG CCGGTTTACA CGATCGTGCG GGGAGAAGTG
GTGATGCGGG ACGGCCAAAT CCTGGCGCAA CCGGGCTTTG GCCGTTTTCT GCCGGGCAAG
GCCGCTTCCG GAGCCTAA
 
Protein sequence
MNSIDLIVRG GTIYAADGHY RADIAVKDER IVAIGHAELF PRARTEVDAT GLCVLPGLWH 
THCHFREPGH TDKEDFTSGT RAAAAGGITF CIDMTNNTPH PSTLEDFQMK LGIAREKACV
DFGLYGAGLY PDQIGKLAGA GAIGIKVFNT RHIKEVYPYI SELGVLNHGL LYEIYEAVAD
TGLICSVHHD DPDWCRRMTF REYINVGKTE NRHYMEAYEK GYMYGHGMVA GLAASLYYAD
LAGVSLYVLH LGVMPPGAYE MIRHAKVELG QEVYAELEIS TALMTRKQAE KVGPCTYVWA
YSPETAWDSL ESGVTDVIVG EHAPHTVAEM EPGWKDNFSV PLGITGAQEF IPLMLTQVNN
GTLRLEDLVW YCSESPARIF GVYPRKGTIS IDADADFTIV DMNRRKILTG ADMYTKSRTT
SWEGMEVTGM PVYTIVRGEV VMRDGQILAQ PGFGRFLPGK AASGA