Gene Sfum_2144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2144 
Symbol 
ID4459533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2621272 
End bp2621988 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content61% 
IMG OID639702910 
ProductABC transporter related 
Protein accessionYP_846261 
Protein GI116749574 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCC TCGTTGTCAA AGACCTTGAG GTGAAATATG GTGACACCCA GGTCCTCTGG 
GGACTGGATC TCACTATCGA GCGGGGAGAG TTCGTCGCCC TGGTCGGAGC AAACGGAGCC
GGGAAGACCA CTTTCCTGAA GACGGTCGTC GGCCTGCTGC CCGCGGCGGC CGGGAGCCTG
CATTTTGCCG GTGAAGAAGT CTCCGGCATG CCGGTGGAGT ACAGGATCAG GAAGGGCATG
GCAATGGTTC CCGAGGGGAG GCGACTGTTC AAGGGCATGT CGGTCATGGA CAATCTCATG
ATCGGCGCAC ACTTTCGCGA GGATCGTCCA CAGGTCCATG AAGACCTGGG CAAGGTGTTC
GGATACTTCC CGGAACTGGA GCGTTTGAGG AAGCGGGTGG CGGGCGACCT GTCCGGGGGA
GAACAGCAGA TGTGCGCGGT CGGCCGGGCT CTGATGGCCA GCCCCGGGCT TCTGCTGGTG
GACGAAATGT CCCTGGGTCT GGCGCCGGTT GTTGTGGAGC GCCTGGCCGA GGTGCTGGCG
AAAATCAACG TCAATGAACG GATGAGTGTC CTGCTGGTCG AACAGGACGT GGAAATCGCC
CTGGAATTGA GCAGCCGGGG ATATGTTCTG GACAACGGGC AGGTTACAAT GAGCGGCGAT
GCCGGGGAGC TGCTGCGGCA TCCGCAGATC CGGGAAGCCT ATCTGGGGCT GACCTGA
 
Protein sequence
MSILVVKDLE VKYGDTQVLW GLDLTIERGE FVALVGANGA GKTTFLKTVV GLLPAAAGSL 
HFAGEEVSGM PVEYRIRKGM AMVPEGRRLF KGMSVMDNLM IGAHFREDRP QVHEDLGKVF
GYFPELERLR KRVAGDLSGG EQQMCAVGRA LMASPGLLLV DEMSLGLAPV VVERLAEVLA
KINVNERMSV LLVEQDVEIA LELSSRGYVL DNGQVTMSGD AGELLRHPQI REAYLGLT