Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_2109 |
Symbol | |
ID | 4459568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 2579943 |
End bp | 2580335 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639702876 |
Product | cache, type 2 |
Protein accession | YP_846227 |
Protein GI | 116749540 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4564] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000614134 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00251106 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCCCGA GAGCACCGGA AGACGCAAAG GCCTGGGTGG AAAATGCGAA GCAGTTTTAC CGGTCCGCAG GCAAGAGGAT CGCCTTGGCG GAATTTACGA ACCCCACGGG AATGTTCATT CAAGGGGAAA TGTACATCTA CGCACTGAAT CCCAAAGGAA CGATGCTCGC CCACGGAGTC AACGAGAAAT ACGTCGGCGA GGAGTTCATC GATCTCATGG ATTCCGACGG CAAGAAATTC ATCAAAGAGA TCATCGACAC CGCCAATGCC AAAGGCGCCG GCTGGGTGGA GTACAAATGG TACCATCCGG TCACCAAAGA ATGGCTTCCC AAAATCGCCT ATTTCGAAAA GGTCGACGAC CTGATCATCG TCAGCGCCGT GTACAAGAAC TAG
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Protein sequence | MSPRAPEDAK AWVENAKQFY RSAGKRIALA EFTNPTGMFI QGEMYIYALN PKGTMLAHGV NEKYVGEEFI DLMDSDGKKF IKEIIDTANA KGAGWVEYKW YHPVTKEWLP KIAYFEKVDD LIIVSAVYKN
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