Gene Sfum_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2109 
Symbol 
ID4459568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2579943 
End bp2580335 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content53% 
IMG OID639702876 
Productcache, type 2 
Protein accessionYP_846227 
Protein GI116749540 
COG category[T] Signal transduction mechanisms 
COG ID[COG4564] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000614134 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00251106 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCCCGA GAGCACCGGA AGACGCAAAG GCCTGGGTGG AAAATGCGAA GCAGTTTTAC 
CGGTCCGCAG GCAAGAGGAT CGCCTTGGCG GAATTTACGA ACCCCACGGG AATGTTCATT
CAAGGGGAAA TGTACATCTA CGCACTGAAT CCCAAAGGAA CGATGCTCGC CCACGGAGTC
AACGAGAAAT ACGTCGGCGA GGAGTTCATC GATCTCATGG ATTCCGACGG CAAGAAATTC
ATCAAAGAGA TCATCGACAC CGCCAATGCC AAAGGCGCCG GCTGGGTGGA GTACAAATGG
TACCATCCGG TCACCAAAGA ATGGCTTCCC AAAATCGCCT ATTTCGAAAA GGTCGACGAC
CTGATCATCG TCAGCGCCGT GTACAAGAAC TAG
 
Protein sequence
MSPRAPEDAK AWVENAKQFY RSAGKRIALA EFTNPTGMFI QGEMYIYALN PKGTMLAHGV 
NEKYVGEEFI DLMDSDGKKF IKEIIDTANA KGAGWVEYKW YHPVTKEWLP KIAYFEKVDD
LIIVSAVYKN