Gene Sfum_2096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_2096 
Symbol 
ID4459590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp2562908 
End bp2563750 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content64% 
IMG OID639702863 
Productamidohydrolase 2 
Protein accessionYP_846214 
Protein GI116749527 
COG category[R] General function prediction only 
COG ID[COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0644654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG ACGTGCACAC GCACATTTTT CCACCGGAAA TCATCTGGGG ACGCGAGCGG 
CACTTCGAGA GCGACCCTTG GTTCAAGCTG CTCTACAGCC CGCCCAAGTC ACGAATGGCC
AGCGCCGGAG TGCTCATCGA CGCCATGGAC GAAGACGGCG TCGACCGTGC CGTCGTTTTC
GGATTCCCCT GGTTCGACAC GGATACCGTC ACGCGGCACA ACGACTACAT CCTCGAATCG
GCGGTTAAGT ACAGTCCACG GCTCGTACCC CTTGCCTGCG TGAACCCGCT CACCCGCTCC
GGCCCCATCG AGGCCGAACG CTGCCTGCGC GCGGGCGCGG CGGGCCTGGG GGAACTGGCC
GTCTACGGGC CGTGCGACGA ACGGACGGCG CTCGGCAGGT TCCGGGACCT GTTCGACTGC
TGCCGCTCCC GTCGGTCGGT CCTGCTCGTC CACGCCAACG AACCCGTGGG GCACGTCTAT
CCTGGCAAGG CCCCGCTCGG CCTCGACTTC TATTACAGGC TGGCCGCCGA CGCGGCGGGA
ATCCCGCTCA TCTTCGGCCA CTGGGGAGGA GGCCTGTGCT TCTATGAGCT CCTGAAAAAG
GAAGCCCGGG AAGTCCTCGC CAACGTTTAC TACGACACCG CCGCCTCGCC TTTCCTCTAC
GACGCGTCCA TCTACCGGCA CATGTCCGAA ATGCTTCCGG CGGGGAAGAT CCTCTTCGGC
AGCGACTATC CCCTCATCAA ACCCGCCCGG TATTTTCGCG AAATGGCCGA ATCCGGCCTC
CCGGAACCTC ACATGCAAGC GATCTGCGGC GGCAACGCCG CCCGGTTGTT TGGACTCCCC
TGA
 
Protein sequence
MRIDVHTHIF PPEIIWGRER HFESDPWFKL LYSPPKSRMA SAGVLIDAMD EDGVDRAVVF 
GFPWFDTDTV TRHNDYILES AVKYSPRLVP LACVNPLTRS GPIEAERCLR AGAAGLGELA
VYGPCDERTA LGRFRDLFDC CRSRRSVLLV HANEPVGHVY PGKAPLGLDF YYRLAADAAG
IPLIFGHWGG GLCFYELLKK EAREVLANVY YDTAASPFLY DASIYRHMSE MLPAGKILFG
SDYPLIKPAR YFREMAESGL PEPHMQAICG GNAARLFGLP