| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_2022 |
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| Symbol | |
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| ID | 4459653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 2473983 |
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| End bp | 2475734 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639702788 |
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| Product | thaumatin, pathogenesis-related protein |
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| Protein accession | YP_846140 |
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| Protein GI | 116749453 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.431794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAACA TTCCCACTGC ACATCCGAAA ATGCCGTCCC ACAGTCTCAA GGCGGGTTTC
CTGGCGGTCG TCCTGGCGGT CCTGCTCAGC GCCTCCCACG CCTTCGCCAC GCAGGTGCTT
TATGTCATCG GGGGAACCAC TCCGACCGTG GGGGAACTGA TCCTCAAGGA CCGCCTGGTA
AAAAGGGGAT TTGTGGTTGT GGTTCGAGAT ACCGGGAATG TCGCCGTCGC GAACGCCCTC
GACAAGGATT TGATCATCAT CTCCGAGTCG GTGGTGTCCA CAGGGCTGAA GACGCTTCTG
CGCGACGTGC ATACCCCCAT CATCTGCTTT GAACCCTACC AGTTCGACGA CCTGGGCATG
ACGGATTCCA AGCCGGGCGA ATCGTACGGA TCGGTCGAAG AGCAACAGAA CCTGGTGATC
GCCAGGCCGG GTCATCCCCT GGCCGCCTCG CTCGACGGCG TCGTGGAAGT CGCCGAACGG
GACATCAGGA TGGGATTCGG CACGCCGGGG ACGAACGCCA TCCCCATCGC CACCCTGATC
AACTCTCCGG ACATGTACGC GATTTTCGCC TACAAGGCGG GGGCGCGGAT GCCTGGGCTC
GCGGCGCCGG GCATCCGCAT CGGCTACTAT CTGCCGCGGA ACGCCCCGAA CGTGATGACG
GCCGAAGGGT GGAAACTGTT CGATGCCGCG GTGACTTGGG CCATGACCCC GCAATTGCCC
GCCATACCGC CCACTCCGCC CGGCAAGAGG ACGCTCGTTT TTTACAACAA CTGTTCCCGG
AAGATCTGGG TGGGCGCGTC CGGAACGGTT CCGGATTGTT CCGCGTGCAA CTGCGCCAAG
CAAAGCTGCC CTGAAAAACC CTGGAAGGGT ACAAGCACCG GTTTCGAGCT TCTTCCGACA
GCGAACAAAA ACACCAAGAT CATCCAGGTT CCAAACAACC TGCAATCGGC GGAATTCTGG
GCGCGCACCG GCTGCAGATG GGAGACGAAC CCCAGCTGGG AGGGGCCGCG GTTCATCTGC
GACACCGGCG ATTGCGGCAA CGCATCTGCG GGATTCAGGG TGCCGTGCAA CGGGGGCACC
AAGGCTCCCC CCGCGAACGC CCTTGAAGTC ACTTTCAATC CGTCCACGGG ATTCTTCAAC
GGAGTCGCCG TGATAAGAAC CGACACCTAC GATCTCACCA ACGTGGACGG TTACAGCCGC
GCGATCAAGG TGGAACCCCT GAAGGGAAGG TACAAGAAAG TCAGCCCCTA CAACGGACTT
CCAAAGTACA ACTGCGGGAA AGCGCAGTGC ACCTTCGACA TGAGGAAGTG CCCTCCGGAG
CTGAGCGCGG TCGACGGGAG CGGGAAGAAA GTCTGCTGGA GCCTCTGCAA GGCGGTGATG
GACCCGATCC AGCGTGAAAA GCATTCGGTG TTGAAGGCGA TCTACAACAA CCCCGACAAG
CGAGCCCTGG TGTGCTGCGC CTGCGACTGC GGGGCCGGGT GCGGGTGCGG AGACATTCAC
TGCAAGTACG GTTGTTCGCC CTACAACAAG AATCTGCCCA CCCCTCACGG AGGCATCTGC
CATTACGAGA AATGGCCCAA ACCGAATGCG ACGTGGTGCA AGAATGCCGG GCTGAGCGAA
GCGAACTGCA ACTATCAGGC GATTTACAAG AGCCAGTGCC CCGATGCATA CAGTTGGCAA
TTCAATGACA ACAGCAGCAC CTTTCAGTGC AAGGACGCCG ATTACCTGAT CACCTTCTGC
CCCAGCATGT AG
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| Protein sequence | MPNIPTAHPK MPSHSLKAGF LAVVLAVLLS ASHAFATQVL YVIGGTTPTV GELILKDRLV
KRGFVVVVRD TGNVAVANAL DKDLIIISES VVSTGLKTLL RDVHTPIICF EPYQFDDLGM
TDSKPGESYG SVEEQQNLVI ARPGHPLAAS LDGVVEVAER DIRMGFGTPG TNAIPIATLI
NSPDMYAIFA YKAGARMPGL AAPGIRIGYY LPRNAPNVMT AEGWKLFDAA VTWAMTPQLP
AIPPTPPGKR TLVFYNNCSR KIWVGASGTV PDCSACNCAK QSCPEKPWKG TSTGFELLPT
ANKNTKIIQV PNNLQSAEFW ARTGCRWETN PSWEGPRFIC DTGDCGNASA GFRVPCNGGT
KAPPANALEV TFNPSTGFFN GVAVIRTDTY DLTNVDGYSR AIKVEPLKGR YKKVSPYNGL
PKYNCGKAQC TFDMRKCPPE LSAVDGSGKK VCWSLCKAVM DPIQREKHSV LKAIYNNPDK
RALVCCACDC GAGCGCGDIH CKYGCSPYNK NLPTPHGGIC HYEKWPKPNA TWCKNAGLSE
ANCNYQAIYK SQCPDAYSWQ FNDNSSTFQC KDADYLITFC PSM
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